Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448742
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Entry
135448742 CDS
T09958
Symbol
RTN1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448742 (RTN1)
03036 Chromosome and associated proteins [BR:
zle03036
]
135448742 (RTN1)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
135448742 (RTN1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135448742 (RTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
ArsP_1
Motif
Other DBs
NCBI-GeneID:
135448742
NCBI-ProteinID:
XP_064571017
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Position
5:complement(189607..313534)
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AA seq
752 aa
AA seq
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MSAPPDPQDLLLAGSALHWAADGAAGAPLRDGDGAEQRQQLGFGSAREHPPVTMATASPG
VTGSSHLFDYGSTANGGDNSFYTSLISDVHYTTPRDSTYFTGIYQQENTPIPCSGSTEGF
NALGHPVQDVTGFESRGLFSSDSGIEMTPAESTEVDKTLADPMKVEGYKYMDMSRSEEIK
YQEKHDSDSEDESPGLSDKYRGTPVGSSHAAEPPQTPFETTKAAKEQDLLEDRKSGGQHS
PSGGTTPVKITLTETENTKEAASKEPSPTQPDTGLKPSHEVVPTVTVSEPEDDSPGSVTP
PSSGTEPSGSESQGKGSLSEDELISAIKEAKSFSFDAAEAQRGPAAEKREPRPKSGRPAA
APHGEHEASSAESGDSEIELVSEDPLAAEEVLHSNYMTFSHIGGPPPSPASPSIQYSILR
EEREAELDSELIIESCDASSASEESPKREQDSPLMKPKVMDIIKEENNSRADASEYEAGK
MTESRMNRENLAESSSYLKSSFVAPKIGAEPPTSAVSTEELKERVKLKKPIEETVVNQSK
VSSKDFGKKSPLASLLLPFLNKQKAIDLLYWRDIKQTGIVFGSLLLLLFSLTQFSVVSVV
AYLALAGLSATISFRIYKSVLQAVQKTDEGHPFKAYLEMEMNLSQDQIQKYTDCLQLYVN
STVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQA
QIDQYLGLVRTHINTVVAKIQAKIPGAKRKAE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccgccggacccgcaggacctgctgctggcgggctccgcgctgcactgggct
gcggacggggcggccggggctccgctgcgggatggagacggggctgagcagcgccaacag
ctgggattcggctccgccagggaacacccgcccgttaccatggcgactgcatccccaggt
gtcacaggctcgtcacatctcttcgactatggctccactgccaacggaggggacaactcc
ttctacacctccctgatctccgatgtccactacaccaccccacgggactccacctatttc
acaggcatctatcagcaggagaacacccccattccctgctcaggcagcacggaggggttt
aatgccctgggccatcctgttcaagacgtgactgggtttgagtcccgtggcttgtttagc
tcagactcgggaatagagatgactcctgcagagtctactgaagtcgacaaaaccttagca
gatcccatgaaggtcgaaggttacaaatacatggacatgagtagatcagaagaaataaag
taccaagaaaaacacgactccgactcagaagatgagagcccaggccttagtgataagtac
cggggaacacccgtggggtccagccacgccgccgaacctccacagacgccttttgagacc
acaaaggcagccaaggaacaagacctgctggaagacagaaagtctgggggtcagcacagt
ccctctgggggtacaacccctgtcaagatcacactcactgagacagaaaacaccaaggaa
gctgccagcaaagagccgagcccaactcagccggacaccggcctgaagccgagccatgag
gtggtgcccacggtgacagtgtcagagcccgaggatgacagcccaggatctgtcacacca
ccctcctctggcacagaaccatccggctccgagtcgcagggcaaaggcagcctgtcggag
gacgagctcatcagtgccatcaaggaagccaagagcttctccttcgatgccgcggaggcg
cagcgcggcccggccgcggagaagcgggagccgcgccccaagtccggccgccctgccgcc
gccccgcacggcgagcacgaagccagcagcgccgagtccggcgactcggagatcgagctg
gtctcggaggacccgctggccgccgaggaggtgctgcactccaactacatgaccttcagc
cacatcggggggccccctccgtcgcccgcctcgccctccatccagtacagcatcctgcgg
gaggagcgggaggcggagctcgacagcgagctcatcatcgagtcctgcgatgcctcctcg
gcctccgaggagagccccaagagggagcaggactcccccctgatgaagcccaaggtcatg
gacattatcaaggaggagaacaactcgcgcgctgacgcctcggagtacgaggccggtaaa
atgacggagagcaggatgaacagggagaacctggcggagtcctcgtcctacctgaaaagc
tcctttgttgcaccaaaaataggcgctgagcccccgacctctgccgtcagcaccgaggag
ctgaaggaaagagtaaaactgaagaaacccattgaagagactgttgttaaccaaagtaaa
gtgtcttccaaggactttggcaaaaaaagtccgctggcttcgttgctactgccgttttta
aataagcagaaagctatcgacctgttgtactggcgtgacatcaagcagacggggatcgtg
tttggcagcctcctgttgctgctcttctccctgacccagttcagcgtcgtcagcgtcgtg
gcctacctggccctggccggcctctcggccaccatcagcttcagaatctacaaatccgtc
ctacaggccgtgcagaagacggacgagggccaccccttcaaagcctacttggagatggag
atgaatctttcacaggaccagatccagaaatacacagattgtctccagctatacgtcaac
agcacagtcaaagagctgaggagactctttctcgttcaggaccttgtggattctttaaaa
tttgcagtactaatgtggctgctgacttacgtgggagccctcttcaatggcctgactctt
ctgataatggctgtggtgtctatgtttactctccccgttgtatatgacaagtaccaggca
cagattgatcaatacttggggctggtgcggacccacataaacacggtggtggcaaagatt
caagctaaaatcccaggtgctaagagaaaggcagagtaa
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