Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448748
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Entry
135448748 CDS
T09958
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135448748 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zle02000
]
135448748 (ABCC8)
Transporters [BR:
zle02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
135448748 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_29
RsgA_GTPase
MMR_HSR1
nSTAND1
AAA_25
TMD0_ABC
TraD_N
DEAD
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
135448748
NCBI-ProteinID:
XP_064571029
LinkDB
All DBs
Position
5:43863017..43936685
Genome browser
AA seq
1594 aa
AA seq
DB search
MCAEAEAAPGCAQGPAMALAFCGDEGNSTAYNVDHGVLNNGCFVDALNVVPHVFLLFITF
PILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHL
HLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGF
SQLRFCLTGLLVVLYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNL
LSKGTYWWMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYIRLNEAFEAQKNKRSSSPQGS
RSIWRALCCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQIKILGVF
FISSQEFLSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMQLST
SNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGILLLYYLLGISALIGA
AVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFHSSVEE
TRQKEMTSLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFASLSLFH
ILVSPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEHDKSSELRSADNHSKYQAVPLK
VVNRKRPAREDWNNYSSHMRRPINITEADDFCVKITNGFFTWTPEGPPALSNIDIRIPQG
QLTMIVGQVGCGKSSLLLAILGEMQKISGSISWTSCTSDSETGEDFSPEKESPVDMEVRK
RGAVAYASQKPWLLNATVEENITFESSFNKQRYKAVIDACSLQPDIDILPHGDQTQIGER
GINLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDKRTVVL
VTHKLQYLPHADWIIAMKDGNIQREGTLKDIQKSETELFEHWKTLMNRQDQELEKETTVE
ENPVLERHRRTMYSREALLKDDEEDEEEVTESDDEDNLSSVLHQRAKMPWRACGKYLSAA
GILLLPLLLLSQLLKHTVMVAIDYCLALWTERAISFKIEPDTKNCSQCMEFDHSQYSKVF
SILCCLGIILCLVTSIAVEWTGLKVTKKLHSSLLNKIILAPMRFFETTPLGSILNRFSAD
CNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFLIALVPLAIMCYFIQKYFRVASRD
LQQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFLTAANRWL
EVRMEYIGACVVLIAAVTSITSCLYNKITSGLVGLGLTYALMVSNYLNWMVRNLADMEIQ
LGAVKRINGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPVLKHVNAH
ISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRLSIILQD
PILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGENFSQGQRQ
LFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILNSDL
VIVMKRGVILEYDKPEVLLEQEDSVFASFVQADK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggaggcggaggcggcgcccggctgcgcgcagggtcccgccatggccctggcg
ttctgcggcgacgagggcaactccaccgcctacaacgtggaccacggcgtgctcaacaac
ggctgcttcgtggatgcgctcaacgtggtgccgcacgtcttcttgctcttcatcaccttc
cccatcctcttcatcggatggggaagtcagagttccaaagtccatatacatcatagcaca
tggctccattttcctggccacaatttacgctggatactgacttttattctcttgtttgtg
ctggtgtgtgaaattgcagagggcatagtgtctgatggggtatctgaatcccgccactta
cacctgtacatgccagcaggaatggcattcctggcagccatcacatcagttgtctattac
cacaatattgaaacatccaactttcccaaactcttaatagcattgctgttctactggact
ttagctttcataactaaaaccatcaaatttgtgaagttctgtgataatggagttggattt
tctcagcttcgattttgcctcacgggactcttggttgttctttatggaatgctactagct
gtagaaatcaatgtcatcagggtgaggagatacgttttcttcaaaactcctaaagaagtt
aaacctcctgaggatctccaggatcttggtgtgcgattcctgcagccgtttgtgaatctg
ttatccaaaggaacatactggtggatgaacacattcatcaagactgcccataaaaaacca
atagacttgaaaaccataggcaagcttcccattgctatgagagctctgaccaattacatt
cgccttaatgaggcctttgaagcacagaagaacaaaagatcatcatctccccaaggatcc
agatccatttggcgtgctctctgctgtgcttttggaagacccttactcctgagcagcaca
ttccgtattctggctgacttgcttggattcgccgggccactctgtatctcggggattgtt
cacaacgttggaaaaggaaataacaccatccgcccacagattaaaattctgggtgttttc
tttatttcatcacaagagttcctgtccaatgcttatgttttggctgtactcttatttttt
gcccttctgttgcaaaggacatttctgcaagcatcatactatgttgctattgaaacagga
atcaacttgagaggtgcaatacagacaaaaatatacaataaaattatgcagctttcaact
tctaacatgtctatgggggagatgacagcaggccagatctgtaacctggttgccatagac
acaaatcagctgatgtggttcttcttcctctgccctaacctttgggctatgccagtacag
ataattgtaggaattcttctgctctactaccttcttggaatcagtgccttaattggagca
gcagtaatcatagtccttgcacctgttcagtactttgtagcaacaaaactctcacaagcc
cagcgaagcacactggagtactccaacgagagactgaagaagacaaatgagatgctgcgg
ggcattaagctcctgaaactctacgcttgggagcacatatttcacagcagtgtggaggaa
accagacagaaagaaatgactagcctcaagtcttttgccctttacacctccatatccatc
tttatgaatgcagcaataccaattgcagctgtgctcataacatttgttgtccacgctcat
ctgacaagaaaggctgacttctccccatcagtggcatttgcctccctctccctgttccat
atcctggtgtctccattgttcctgctctcaagtgtggttagatccactgtcaaagcatta
gtaagtgtgcagaaattgagtgaattcctgtcaagtgaagaaattggagaagagcatgat
aaatcttcagagctcagaagtgcagataatcacagcaagtaccaagcagtgccactcaag
gttgtgaaccgcaagaggcctgccagggaggactggaacaattacagctctcacatgaga
agacccattaacatcacagaagcagatgatttttgtgtaaagatcacaaatggatttttc
acttggacacctgaaggtcctccagcgttgtccaatattgatatccgaatccctcaaggg
cagctaacaatgattgtaggacaggtgggctgtggtaagtcatctctcttgctggccata
cttggtgagatgcagaagatctctgggagcatatcctggaccagctgcacttctgacagt
gagacgggggaagatttcagcccagagaaagaatctcctgttgacatggaagtcaggaaa
agaggtgcagtagcttatgcatctcagaagccttggctgctcaatgccacagtggaagag
aatatcacatttgaaagctcttttaacaagcagaggtacaaggcagtaattgatgcttgt
tccctccagcctgatattgacattctgcctcacggagaccaaacccagattggagagagg
ggtattaatctgtctggagggcagcgccagcggatcagcgtggcacgagcactttaccag
cagacaaatgttgtgtttctggatgaccctttttctgccctggatatccacctgagtgac
catctgatgcaagaggggatcctgaagatgctgcgggaggacaagcggacggttgtgctg
gtgacccacaagctgcagtacttgccccatgctgactggataattgcaatgaaagatggt
aacatccagagagaaggaacactcaaggacattcagaaatcagagactgagctctttgaa
cactggaagacattaatgaatcgacaagaccaggagctggagaaggaaacaactgttgag
gaaaaccctgttttggaaagacatcggaggacgatgtattcccgggaagcattgctgaaa
gatgatgaagaggatgaagaagaagtaacagagagtgatgacgaagacaacctgtcttca
gtgctgcatcagagagccaagatgccctggagggcctgtggcaagtacctgagtgcagca
gggatcctcctgctgcccctgctgctgctgtcccagctgctgaagcacacggtcatggtg
gccattgactactgcctggcactctggactgagcgtgccatctctttcaagatagagcct
gacacaaaaaactgctcccagtgcatggaatttgatcattctcaatattcaaaagttttc
agcattctttgctgccttggcatcatattatgtcttgtcacatcaatagcagtggagtgg
actggcttgaaagtcaccaaaaagctacactcttctttactaaataaaattattttggct
ccaatgaggttttttgaaacaactcctctgggaagtatattgaacagattctcagctgac
tgcaataccattgaccagcacatcccagctaccctggagtgcttgagccgctccaccttg
ctgtgtgtgtctgccctcgctgtgatctcctacgtcacccccatgttcctcatcgccctg
gtgcccctggccatcatgtgctacttcatccagaagtacttccgagtcgcctcccgggac
ctgcagcagctggatgacagcactcagctaccattactgtcccatttttcagagactgtt
gaaggtcttaccaccatccgagccttcagatatgaagccaaattccgacaaaaacttctt
gaatacacagattccaacaacattgcctcccttttcctcacagcagccaatcgctggctg
gaagttcgcatggagtacattggagcatgtgtggtgctcatagcagctgtcacttctatt
accagttgcctgtataataaaatcacttcaggacttgtaggcttgggactaacctatgct
cttatggtgtcaaactatctgaattggatggttcgtaacctggctgacatggagatccag
ctgggggcagtgaaaaggatcaatggccttctcaaaacagaagctgaaaattatgaaggg
ctcctttcttcatcacagattccccagaactggccagacagaggggagatccaaatccag
aacctcagtgtccgatatgacagcaacctgaagccagtgctaaaacatgtcaatgcccac
atctcaccaggacaaaagattgggatctgcggccgaacaggcagtggaaaatcctccttc
tctcttgcatttttcagaatggttgacacctttgaggggaggattatcattgatggtata
gatattgccaagctgcccttacagacactgagatccaggctgtcaatcatcctccaggat
cctattttattcagtggaacaatccggtttaacttggacccagagaagaagtgcactgac
agcatgctctgggaagcactggaaatagctcagctcaagcacgtggtgaaggcactccct
gggggcctagatgcaatagtcacagaagggggtgaaaacttcagccagggccaaaggcag
ctgttctgcctggcaagggcttttgtgaggaagactagcatcttcatcatggatgaagcc
acagcatctattgacatggcaacagagaacattctccagaaggtggtcatgactgcgttt
gctgaccgcactgtggttacaattgcacaccgtgtgcacacaatcctcaattcagatttg
gttattgtaatgaagagaggggttattttggaatatgacaagcctgaggttctgctagaa
caagaagacagtgtctttgcttcttttgtacaagcagataagtaa
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integrated database retrieval system
