Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448898
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Entry
135448898 CDS
T09958
Symbol
DTX4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135448898 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135448898 (DTX4)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135448898 (DTX4)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135448898 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_2
zf-ANAPC11
zf-RING_11
zf-RING_5
WWE_5
zf-RING_Vps41
zf-RING_16
zf-UDP
zf_RING_Vps8_fungal
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
135448898
NCBI-ProteinID:
XP_064571309
LinkDB
All DBs
Position
5:complement(48012776..48021359)
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AA seq
618 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVARAGPRAGGSVVLGQADSRLAPYIIDL
QSMHQFRQDTGTIRPVRRSYYDPSSAPGKGVVWEWENDSGTWTPYDMDVGITIQRAYEKQ
HPWVDLSAIGFCYVIDFATMGQINRQTQRKRRVRRRLDMVYPLVSGTLPKSQSWPASPGA
AAAPPVPACTCPQCLLVMSVKAAAGPGASTLQPRKAAPAKPPPAPKPAVPAAGPKPPDGV
AAVRGSLKPLAAQGGRRQAASTPALSSAGASGSPPGGAGGGKGSRASLGTLNRSHLQRLA
IAQSRVLIASGVPTVPVKNLTGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPV
SKSEIQSIPGISHSCRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLSAPSG
YKGPQPAVKPDLVGKLVKCSHVFHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPG
KMEYHIIPHALPGHADCKTIRIIYNIPPGVQGPEHPNPGKSFTARGFPRHCYLPDSEKGR
KVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDINYLDNVL
AELAAQGITEESLAQEKD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggcctcggccgtggtggtgtgggaatggctgaacgagcacggccgctggcgg
ccctacagcccggccgtcagccaccacatcgaggcggtggcccgcgccgggccgcgggcg
ggcggcagcgtggtgctgggccaggccgacagccgcctggcgccctacatcatcgacctg
cagtccatgcaccagttccgccaggacaccggcaccatccggcccgtccggcgcagctac
tatgacccgtcctcggcaccgggcaagggcgtcgtctgggagtgggagaatgacagcggc
acgtggacgccctacgacatggacgtgggcatcaccatccagcgcgcctacgagaagcag
cacccctgggtggacctgagcgccatcggcttctgctacgtcatcgacttcgccaccatg
ggccagatcaaccggcagacccagcgcaagcgccgcgtccgccgccgcctcgacatggtc
tacccgctggtgtcgggcacgctgcccaagtcgcagtcgtggccggccagccccggggcg
gcggcggccccgccggtgcccgcctgcacgtgtccccagtgcctgctggtcatgagcgtc
aaagccgccgccggccccggcgcctccacgctgcagccccgcaaggccgcccccgccaag
ccgccgcccgcccccaagcccgcggtgcccgcggcggggcccaagcccccggacggcgtg
gccgcggtgcgcggctcgctgaagccgctggcggcgcaggggggccggcggcaggcggcc
agcacgcccgccctgagctcggccggcgcctcgggcagcccccccggcggcgcgggcggc
ggcaaaggctcccgggccagcctgggcaccctgaaccgcagccacctgcagcgcctcgcc
atcgcccagtcccgcgtgctcatcgcctccggggtccccactgtccctgtgaagaacctc
actggctccagccccgtcaacccagcactggcagggatcacggggatcctcatgagcgcg
gccgggctgcccgtgtgcctgacccggccccccaagctggtgctgcaccccccgcccgtc
agcaagagcgagatccagtccatccccggcatctcccactcctgccgcaagaccaccaag
aaacaggccaagaagggtaaaacccctgaggaggtgctgaagaaatacttgcagaaggtg
cggcatccgcccgatgaggactgcaccatctgcatggagcgcctctctgccccctctggc
tacaaggggccccagccggccgtcaagcctgacctggtggggaagctggtcaagtgcagc
cacgtcttccacctccactgcctggtggccatgtacaacaacggcaacaaggatgggagt
ctgcagtgtcccacctgcaaaaccatctatggggtgaagacagggacgcagcctcccggg
aagatggaatatcacatcatcccccacgcgctgcccggccacgccgactgcaaaaccatc
cgcatcatctacaacatccccccgggggtgcagggaccagagcatccaaaccctgggaag
agcttcacggcccgtggctttccccggcactgctacctgccagacagcgagaagggcagg
aaggtactgaagttgctgctggtggcctgggaccggcgcctgatcttcgccatcgggacc
tccagcaccacgggcgagtcagacacggtgatctggaacgagatccaccacaagacagag
ttcggctccaacctcaccggccacggctaccccgacatcaactacctggacaatgtcctg
gccgagctggcagcccagggcatcaccgaggagagcctggcacaggagaaggactga
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