Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448914
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Entry
135448914 CDS
T09958
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135448914 (SSRP1)
03036 Chromosome and associated proteins [BR:
zle03036
]
135448914 (SSRP1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
135448914 (SSRP1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
135448914 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
SSRP1_C
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135448914
NCBI-ProteinID:
XP_064571338
LinkDB
All DBs
Position
5:complement(48149269..48155692)
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AA seq
705 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDS
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRDDKKPAKKAKIVKERKPRKKQPESKKGK
DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYSVGGKADSHRGERSKKKKKKQEKQVKGKGDKKGATSKSSSSKSPAKGM
SDSFKSKEFVSSDESSSAESKKEDSEEEGAASPAPSSEDSASGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgctggagttcaacgagatctaccaggaggtgaaggggtccatgaacgat
gggcggctgcggctgagccggcagggcgtcatcttcaagaacagcaagacggggaaggtg
gacaacatccaggcctcggagctggccgagggcgtgtggcggcgcgtggcgcttgggcac
ggcctcaagctgctcaccaagaacggccacgtctacaagtatgacgggttccgggagtcg
gagtttgacaagctctcagatttcttcaaggcccactattgcctggagcttgcagagaag
gatctgtgtgtgaagggctggaactggggcacagtgaggtttggagggcagctgctgtcc
ttcgacatcggggagcagccagtgttcgagatcccgctcagcaacgtgtcccagtgcacc
acgggcaagaacgaggtgacgctggagttccaccagaacgacgatgccgaggtctccctc
atggaggtccggttctacgtgccccccacccaggaggacggcgtggaccccgtggaggcc
ttcgcccagaacgtgctgtccaaggcggacgtgatccaggccaccggagacgccatctgc
atcttccgggagctgcagtgcctgacgccgcgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctcccgcacaaggaccagcgccagatgttcttcgtgatcagtctggac
cccccgataaagcaaggccagacccgctaccacttcctcatcctgctcttctctaaggat
gaggacatctccctgaccctcaacatgaatgaggaggaggtagagaagcgctttgagggg
cggctcaccaagaacatgtcaggctccctctacgagatggtcagccgggtgatgaaggca
ctggtgaaccgcaagatcaccgtgcctggaaatttccagggacactctggagcccagtgc
atcacctgctcctacaaggccagctcagggctgctgtacccgctggagaggggcttcatc
tacgtgcacaagccccccgtgcacatccgcttcgacgagatctccttcgtcaactttgcc
cgtggcaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcacccag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaatgcc
aagaagctgaacatcaagaaccggggcctgaaggagggaatgaagcagagctatgatgaa
tacgctgactctgatgaggaccagcacgatgcctacttggagaggatgaaagaggagggc
aagatccgggaggagaatgccaatgacagcagtgatggctctggggaggagacagactca
tccttcaaccctggagaagaggatgatgatgtggcagaagagtttgacagcaatgcctca
gccagttcctccagcggcgacggcgacagcgaccgcgacgacaagaaaccggccaagaag
gccaagatcgtcaaggagcgcaagccccgcaagaaacagcccgagagcaagaaggggaag
gaccccaacgctcccaagcgcccgatgtcagcctacatgctctggctgaatgccagccgg
gagaagatcaagtcggaccaccctggcatcagcatcaccgatctgtccaagaaggctggg
gagctctggaaggccatgtccaaggagaagaaggaggagtgggatcggaaggcggaagat
gccaggcgggactacgagaaggccatgaaggaatacagtgtgggcggcaaggccgacagc
cacaggggggagaggtcaaagaagaagaaaaagaagcaggagaagcaggtgaaggggaaa
ggggacaagaaaggtgccacctccaagtcctcatcctccaagtccccagctaagggcatg
agtgacagcttcaagagcaaggaatttgtgtccagcgatgagagctcctctgcagagagc
aagaaggaggactcggaggaggagggagctgccagcccggcccccagctcagaggactct
gcctcgggctcggattag
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