Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448949
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Entry
135448949 CDS
T09958
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03030
DNA replication
zle03410
Base excision repair
zle03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135448949 (FEN1)
03410 Base excision repair
135448949 (FEN1)
03450 Non-homologous end-joining
135448949 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zle03032
]
135448949 (FEN1)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135448949 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135448949 (FEN1)
DNA replication proteins [BR:
zle03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
135448949 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
135448949 (FEN1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
135448949 (FEN1)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135448949 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
135448949
NCBI-ProteinID:
XP_064571409
LinkDB
All DBs
Position
5:complement(48494780..48497671)
Genome browser
AA seq
386 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGADVLQNEDGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
ENIEKYSKRLVKVTPQHTQECKKLLALMGIPYVEAPGEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLQLTWEQFVDLCILLGCDYCGSIRG
IGPKRAVELIREHKSIERIVQQLDTKKYPLPENWLHKEAQKLFLEPDVIDPEAVELKWSE
PDEEQLVQFMCGEKQFNEERIRNGVKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPEP
KGGAKKKAKSNSKPNGTPATKTKKAK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcttggccaagcttattgccgacgtggctcccggggccatccgggag
aacgacatcaagtcctacttcggccggaaagtggccatcgacgcctccatgagcatctac
cagttcctgatcgccgtgcggcagggagccgacgtgctccagaacgaggacggggagacc
accagccacctgatgggaatgttctaccgcaccatccgcatggtggagaacggcatcaag
cccgtgtacgtgttcgacgggaagcccccgcagctgaaatccggggagctggccaagcgc
acggaacgccgcgccgaggcggagaagcacctgcaggaagcgcaggaggccggggaggag
gagaacatcgagaagtacagcaagaggctggtcaaggtgaccccgcagcacacgcaggag
tgcaagaagctgctggcgctgatgggaattccctacgtggaggcccccggcgaggcagag
gccagctgcgccgccctggtgaaggccggcaaggtgtacgccgccgccacggaggacatg
gattgcctcaccttcggcagccccgtgctgatgcggcacctcacggccagcgagaccaag
aagctgcccatccaggagttccacctgaaccggatcctgcaggacctgcagctgacctgg
gagcagtttgtggacctgtgcatcctgctgggctgcgactactgcggcagcatccgcggc
atcgggccgaagcgcgccgtggagctcatccgggagcacaaatccatcgagaggatcgtg
cagcagctcgacaccaagaagtaccccctgcccgagaactggctgcacaaggaggcgcag
aagctcttcctggagcccgacgtgatcgatcccgaggccgtggagctgaagtggagcgag
ccggacgaggagcagctggtgcagttcatgtgcggggagaagcagttcaacgaggagcgc
atccgcaacggcgtcaagaggctgagcaagagccgccaggggagcacccagggccggctc
gacgacttcttcaaggtcaccggctccatcacctcggccaagcgcaaggagccggagccc
aagggaggggccaagaagaaagccaagagcaactccaagcccaacggcaccccggccaca
aagactaaaaaggcaaaataa
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integrated database retrieval system
