Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448973
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Entry
135448973 CDS
T09958
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135448973 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135448973 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135448973 (VPS36)
Membrane trafficking [BR:
zle04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
135448973 (VPS36)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135448973 (VPS36)
Exosomal proteins of colorectal cancer cells
135448973 (VPS36)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
GRAM
BBL5_2nd
Sigma_reg_C
BBL5
DUF5847
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
135448973
NCBI-ProteinID:
XP_064571461
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All DBs
Position
1:64569728..64588581
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AA seq
386 aa
AA seq
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MDRFSWTTGLLELGETLVIQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYVKLSFKEHGQIEFYR
RLSEEITQRRWESLPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIKFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtgatccag
cagcgcggcgtgcgccttagcgacggcgaggagaaggtgaaatttgatagtggagtttta
ctgctgagcacacacagactgatctggagggatcagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtatttattgaagagcaagcagctgggataggaaagagtgcc
aaaatagtagttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcctatgtcaagctttctttcaaagaacatgggcagattgagttctacaga
cgattatcagaagaaatcacacagaggagatgggagagcctgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggctgtaggaattgttggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaagac
cttagcaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagccaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaagttcaagtcctac
ctactgagtatgggtatagctaatccagttacaagggaaacatatggatctggtacacag
taccacatgcaactggcaaagcaactggctggaatcctgcaggcacccctagaggagcga
ggggggatcatgtctctgacagaagtgtactgcctggtgaatcgtgctcgagggctggag
ttgctgtcaccagaagatttagtaaatgcttgtaaaatgctggaatcactgaaattacca
ctaaggcttcggatatttgatagtggtgtcatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ctatttctgacacaaagctaa
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