Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449042
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Entry
135449042 CDS
T09958
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135449042 (PPFIA1)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135449042 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
BMT5-like
Motif
Other DBs
NCBI-GeneID:
135449042
NCBI-ProteinID:
XP_064571569
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All DBs
Position
5:complement(49936221..49990054)
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AA seq
1264 aa
AA seq
DB search
MMCEVMPTISEAEIPAGGNGGHGSGSPLQSDADSHFEQLMVSMLEERDRLLETLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKKTLPDGMLDINHEQETTPTTNGKRSSD
GSLCHDENLAKVIELQDIIDKQNKEQTQMKERLTALSSRVTELEEDLDTARKDLIKSEEM
NTKLQRDVRETLAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIATKDSMHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALTKSDLLSPGSSAAKDAKV
LELATKLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSETVDKLL
SESNERLQLHLKERMAALEDKNSLLREIENAKKQIEELQHEKDQLVLNVDALRAENDQVR
LRATSLHHSRADFRFPVPSSSVGDSHTDSYSSSSVLRRPQKGRLAALRDEPSKVQTLNEQ
DWERAQQASVLANVAQAFESDVDVSDMEDDRETIFSSVDLLSPSGQADAQTLAIMLQEQL
DAINKEIRLIQEEKENTEQRAEEIESRVGSGSLEAHGRFRPLGSVALGGALAGSSPPGSG
RSTPRRVPHSPAREVDRLGIMTLPSDLRKHRRKSPASREEVRDDKTTIKCETSPPSSPRS
LRLDRVQKGALHTVSHEDIRDIRNSTGSQDGQTSNPSSSNSSQDSLHKAPKKKGIKSSIG
RLFGKKEKGRPGQGSKEALGQGGLGEADGSSQDALGLSKLGGQAEKNRKMQKKHELLEEA
RRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNP
LHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWVTHEEMENLTATQQTEDEEGSWAQTLA
YGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQ
CGIMCLRRLNYDRKELERKREESQNEIKDVLVWSNERMIQWVMSIGLKEYANNLQESGVH
GALVALDESFDYNALALLLQIPTQNTQARAVLEREFNNLLAMGTDRRLDEDDDKSFRRAP
SWRKKFRPKDIRGLAAGSAETLPANFRVTTSMSSPSMQPKKMQIDGSVSGTQRLDSATVR
TYSC
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaaccatcagcgaggccgagattcccgccgggggaaatgga
ggccacggttcaggttccccgctgcagtcggatgctgattcccactttgagcagttaatg
gtgtccatgctggaggagagggatcgcctgctggaaacgctccgcgaaactcaggagacg
ctcgccctcacccagggcaagctgcatgaggttggccatgagagggattccttgcagagg
cagctcaatactgcacttccacaggaatttgcagcactcacaaaagagctgaatgtatgc
agggagcagctgcttgaaagggaagaagaaattgctgaactgaaagcagaaaggaataac
acaaggctattactggaacatttggagtgccttgtctccaggcatgagcgatccctcagg
atgactgttgtgaagaggcaagctcagtctccagcaggagtttctagtgaagtagaagtt
ctcaaagcactaaaatccttatttgagcaccacaaagcccttgatgaaaaggtaagggag
agattacgagtagcacttgaaaggtgtagcttattggaagaagaactaggtactacacat
aaagagttaatgattctgaaagagcaaaataatcagaagaaaacacttccagatgggatg
ctggatataaatcatgaacaggaaactacaccaactacaaatgggaagagatcctctgat
ggttcgttatgccacgatgaaaaccttgctaaagtgattgaactccaagacatcatagat
aagcaaaacaaagagcagacacaaatgaaggaacgcctcactgctttgtccagcagagta
acagagctggaagaagatctagacacagcaaggaaagacttaatcaaatctgaagaaatg
aacacaaagttacagagggatgtacgagagactctggcccagaaggaggacatggaggag
aggatcaccactctggagaaacgctacctcgctgcacaacgtgaagctacatccgtgcac
gacctcaatgataaacttgaaaatgaaattgccactaaagactccatgcaccgacagagt
gaagataagaacaggcaactgcaagagcgactggaactggctgagcagaagctgcagcag
accctgagaaaagctgagacattgccagaggtggaggctgagctggcacagagagtggca
gcacttacaaagtctgaccttttgtctcctgggagctctgctgctaaagatgctaaagtt
ttggaacttgccaccaagcttaggaaggctgaggagagacacggcaatatcgaggagcgg
ctgagacagatggaggcacagcttgaagagaagaatcaagaactgcaaagggctagacag
agagagaagatgaatgaagagcataataaacgtttgtcagaaactgttgataagctcctg
tctgaatccaatgaaaggctccagcttcatctcaaggagaggatggctgccctggaagac
aagaattcacttctacgagaaattgaaaatgcaaaaaaacaaatagaagaacttcagcat
gaaaaggatcaacttgtattaaatgttgatgcattgagggctgaaaacgaccaagtgagg
ctcagagccacatcacttcatcatagcagagcagatttcagattccctgtgccatcctcc
tctgtgggggacagtcacacagactcctacagctcctcctccgtgctgaggcggccccag
aaggggcggctggctgctctcagggacgagccttccaaggttcagaccctgaatgagcag
gattgggagcgggcccagcaagccagtgtgttggcaaacgtggcacaagcatttgagagt
gatgtggatgtgtctgacatggaggacgacagggagaccattttcagctcagtcgatctg
ctgtcaccaagcggtcaggctgatgctcagactttggccataatgctgcaggaacagttg
gatgcaatcaacaaagagatcaggctgatccaggaggagaaggagaacacggagcagcgc
gcggaggagatcgagagccgcgtgggcagcggcagcctggaggcgcacggccggttccgc
ccgctgggctcggtggcgctcggcggggccctggccggctcctccccgcccggcagcggc
cgctccacgccgcgccgcgtcccgcacagccccgcccgggaggtggacaggctgggcatc
atgactctgcctagtgatttaaggaaacaccgtagaaagtctccagcttccagagaagag
gtacgagatgacaaaaccaccataaaatgtgagacatcgccgccttcctcaccccgctcc
ttgcgcctggacagagtccagaagggagctctgcacactgtgagccacgaagatatcagg
gacatcaggaactcaacaggttcacaagatggccaaaccagtaatcccagtagcagtaac
agcagccaagattcccttcacaaagcccccaaaaagaaggggatcaaatcctccattggc
cgcctgtttggcaagaaggaaaaggggcgacctggacagggaagcaaggaagctctagga
caaggtggcctgggagaagcagatggttcctctcaggatgcattaggcctcagcaaactt
ggaggtcaggcagagaaaaacaggaaaatgcagaaaaagcacgagttgctggaggaagcc
agacgacaaggtttgccttttgcacagtgggatgggcccactgtggtggtgtggctggag
ctgtgggtggggatgccagcctggtacgtggccgcctgccgagccaatgtgaagagcggt
gctatcatgtcagcgctgtctgacacggaaatccagcgggaaatcggcatcagcaatccc
ctgcacaggctcaagctccgcctggccatccaggaaatcatgtccttaaccagcccctct
gcccctcccacctcaaggacgaccacgggaaatgtctgggtaacacatgaagagatggaa
aatcttacagccacacaacaaacggaagatgaggagggaagctgggctcagacactagcc
tatggtgacatgaaccacgagtggattggcaatgagtggctgccgagcctggggctccct
cagtaccgcagctacttcatggaatgtctggtggatgctcgcatgctggaccacctgacc
aagaaagacctgcgtgggcagctgaaaatggtggacagctttcacaggaacagttttcag
tgtggaattatgtgcctccgaagactgaactatgatcgaaaagaactggaaagaaaaaga
gaagaaagccagaatgaaattaaggatgtcctggtgtggagcaatgagaggatgatccaa
tgggtgatgtcaatcggccttaaggaatacgccaataacctgcaggagagcggcgttcat
ggcgcgcttgtggccttagatgaatcctttgattacaatgcattggctctcctgctgcaa
atccccactcaaaacacacaggctcgtgctgttctggagagggaattcaataacctcctt
gctatgggcactgacagaagacttgatgaagatgatgataagagctttaggagagcacct
tcgtggagaaagaagtttagaccaaaggacataagaggtttagctgctggatcagcagag
actcttcctgcaaatttcagagttacaacctcaatgtcttcaccctctatgcagccaaag
aagatgcagattgatggcagtgtatcaggaacacaaagattggattctgccacagtaagg
acctactcctgttaa
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