Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449144
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Entry
135449144 CDS
T09958
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135449144 (BMAL1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135449144 (BMAL1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
135449144
NCBI-ProteinID:
XP_064571820
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Position
5:55572787..55625347
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AA seq
633 aa
AA seq
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MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPANGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTAGLESGDAAFPQLAASPHSMDSVLQPGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGMDMIDTEQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagaccct
gctgacttgatctccagttcccttagcacttcaggaatggactgtaataggaaaagaaag
ggaagctcaactgattatcaactcgatggctttccttttgaggaaggtatggatacagat
aaagatgaccaacatggcagattggagtatgcagaccaacaaggcaggataaaaaatgca
agggaggctcacagccagatcgagaagcggcgcagggataagatgaacagcttcatcgac
gagctggcctcgctggtgcccacgtgcaacgccatgtcccgcaagctggacaagctcacc
gtgctcaggatggctgtccagcacatgaaaacacttcgtggtgctacaaacccatataca
gaagcaaactacaagcctgcttttctatcagacgatgaattaaaacaccttattctcagg
gcagcagatggattcctttttgtggtgggctgtgacagaggaaagatactgtttgtttca
gaatctgtcttcaagatcctcaactacagtcagaatgatttgattggtcaaagtttattt
gattatctccatcctaaagacattgccaaagtgaaggagcagctctcttcttctgacacc
gcgccacgagaaaggcttatagatgcaaaaaccggactcccggtcaagacggacatcacg
cccgggccctcgcgcctctgctccggggcacggcgctccttcttctgcaggatgaagtgc
aacaggccctctgtcaaggtagaagacaaggatttcccttcaacctgctcaaagaagaaa
gcagaccgcaaaagcttttgcactattcatagcacaggctacttaaaaagctggcctccc
acaaagatgggcctggacgaagataacgagcccgataacgagggctgcaacctgagctgc
cttgtcgccatcgggaggctccatccccacgtggtgccgcagccggcgaacggcgagatc
cgggtgaagcccaccgagtacgtgtcccggcacgccatcgacggcaagttcgtctttgta
gatcagagggcaacagccatcctggcatacctaccccaggagcttctaggtacttcgtgt
tatgaatatttccatcaagatgatatagcacatcttgcagaatgtcacagacaagttttg
cagacaagagaaaaaatcacaactaactgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctccacaaacacagtggtttccacggcgggcctggagagcggggacgcggcgttc
ccgcagctggcggcgtccccacacagcatggacagcgtgctccagcctggggaaggtggc
cccaaaaggacccatcccactgtgcctggaattccaggtggaacaagagctggggcaggt
aaaatagggaggatgattgctgaagaaatcatggagattcacaggataagaggatcatcc
ccttccagctgtggctcaagtcccctgaacatcaccagcacgcccccacccgacacatcc
tcgccaggagggaagaagatcttgaatggtggcactccagacatttcttcagctgggctg
ctgtctgggcaaattcaggataattctgggtacccgtattccgacaactcctctatcctg
ggggagaactcccacatcggcatggacatgatcgacacggagcagggctccagcagcccc
agcaacgacgaggcggccatggcggtcatcatgagcctgctggaggccgacgcggggctc
ggcggccccgtggacttcagcgacctgccctggcccctgtga
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