Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449186
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Entry
135449186 CDS
T09958
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135449186 (WDHD1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
135449186 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Ctf4_C
WD40
Beta-prop_WDR3_1st
HMG_WDHD1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
EIF3I
WD40_Gbeta
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EML
HMG_box
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
HMG_box_2
NBCH_WD40
KNTC1_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
135449186
NCBI-ProteinID:
XP_064571969
LinkDB
All DBs
Position
5:58920884..58949460
Genome browser
AA seq
1126 aa
AA seq
DB search
MPSKQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMPANHVTFSPDGTKVAAGSSDFMIKV
VEVTDSSKQKTFRGHDAPVLSLSFDPKNVYLASASCDGSVRVWSIADQTCTTSWLLLQKC
NDVINAKSICRLAWQPGTGKLLAVPVDKVVELFRRETWDSQFNLSDASITQPLNVVAWSP
CGQFLAAGSVDGNLVVWNVETQQCIERMKHEKKYSICGLAWHPKYKQIAYTDSEGNLGLL
ENIGDAEKPNDKVASAVAKDYNDLFDGDDDEYLNGDVIEPPSSPKTGDHEDDADDLMQPP
GHVRRAVIDDDDDNSLDIGLIKASSSLLEKEDDGDDQPGGFSALPPSSTQQPFYDGPMPT
PKQKPFQSGSTPVHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSVHHATHLPNSLGH
TMAALSTEAILLACESTEELASKLHCIHFGSWDANKEWTVDMPKDEEIEAICLGQGWAAC
ATSALLVRVFTVGGVQKEIFTLPGPVVSMAGHGEQLMLVYHRGTGFDGDQCLGVQLMELG
MKKRQILHGDPLSLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWVPVCNTREH
CKGKYDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFKLPYCQVETEKGQMEE
QYWRSVLFHGYMDYLSKNGYEFDENAKNQAVKEQQELLMKLFALSCKLERESRCVELAGL
MTHSVLNLAIKYASRSRRLNLAQLLSEVAVEKASELAAAQQEEEEEEEEEDFRKRSSAGS
SATKWGQLPGRNVQQDQEVEDEEETDACEEAEEIPEVHQEKEPNGFSKGVTSAEVTTPKP
ALVASSSRGRVNPFKVASSKKEPVVPSGNVLDNMTKYSKKTSSSGSRAADKQNPPVIKPL
TPKPKTKQASAASFFQPRTPASNPREKTVEEREEKAGNESQEAKVTAQENTENRRPRTGF
QMWLEENRANILTDNPDLNEAEVIKEGMSRFRMLTSEERMVWTEKARGGRVNDSAEDKKR
KRPPADEDEVKKSQEQKSEDTNVSKKSKPLDPSTNNRLSAFAFKQS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaagcagaagccaatgcggtacggccacaccgagggacacaccgatgtctgc
ttcgatgacaccggcagctgcattgtgacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatccaaagtccattaatgtgggagaaaaagcctactcatgt
gctctaaagaatggaaggctgatcactgcagtctccaacaacactgtccagatccacaca
tttcctgagggagctccagatgggatcctcactcgtttcaccatgcctgccaaccacgtc
accttcagtcctgatggcaccaaagttgctgctggctccagtgactttatgatcaaagtt
gtggaggtgactgatagcagcaagcagaaaacatttcgaggacatgatgctcctgtttta
agcctttcttttgaccccaagaatgtttacctggcctcggcgagctgtgacggttctgtc
agagtctggagcattgcagatcagacatgcacgacaagctggctgctgctgcagaaatgt
aatgatgtgataaatgctaaatcaatctgcaggcttgcctggcaacctggcactggcaag
ctgctggcagttcctgtagataaagttgttgaactgttcaggagagagacctgggatagt
cagtttaatctgtcagatgcctccatcacacagcccttgaatgttgtggcctggtctccc
tgtgggcagttcctggcagctggaagtgtggatgggaatttagtggtgtggaatgtggaa
acccagcagtgcattgagaggatgaagcatgagaaaaaatactcaatttgtggactggca
tggcaccctaaatataagcaaattgcttacacagacagtgaaggaaatctggggctgttg
gaaaatattggtgatgcagagaagccaaatgacaaggttgccagtgcagtggccaaagac
tacaacgatctgtttgatggagatgatgatgaatatttaaatggggatgtgattgagcca
ccttcttccccaaaaactggagatcatgaggatgatgctgatgacctcatgcagccccca
ggccacgtgagacgggcagtaattgatgatgatgatgataactcactagatattgggttg
ataaaagctagttccagtcttctggagaaggaggatgatggtgatgatcagcctggtggc
ttttcagctttgccaccatcatctacacaacagcctttctatgatgggccaatgccaacc
cccaagcaaaagcccttccagtctggctccactcctgtgcatctgatgcatcgattcatg
gtgtggaattcggtgggaatcattcgctgctacaacgacgagcaggacaacgccatagac
atcgagttccacgacacctctgtgcaccatgccactcacctgcccaactccctgggccac
accatggctgccctctccactgaagccatcctgctggcctgtgagagcactgaggagctt
gcaagcaagctgcactgcatccattttggctcctgggatgccaacaaggagtggactgtg
gatatgccaaaggatgaagagattgaggccatctgcctgggtcagggctgggctgcctgt
gccaccagtgccctcctggtccgtgtgttcacagttggaggagtccagaaggagatcttc
actctcccaggcccagtggtgtccatggcaggacatggagagcagctgatgcttgtttat
cacagaggtactgggtttgatggggaccagtgccttggggtacagctgatggagctagga
atgaagaaaagacagattttgcatggagaccctctttccctgacaaggaaatcctatttg
gtgtgggttggattctctgcagaaggaaccccttgttacgtggattccgagggaatcgtg
cggatgctgaaccgagggcttggcaacacctgggttccagtgtgcaacaccagagagcat
tgcaaagggaaatatgatcattactgggtcgttggcatccatgaaaatccccagcagctc
aggtgcatcccctgtaaaggagctcgcttccctcccaccctgccacgacctgctgtagca
atcctgcctttcaaactcccttattgtcaagtggaaacagagaagggacagatggaggag
cagtactggcgttctgttttgtttcatggctacatggattacttgtcaaaaaatggatat
gaatttgatgaaaatgctaaaaatcaggcagtgaaagaacagcaggaacttctaatgaag
ctgtttgctctctcctgtaagctggagcgcgagtcgcgctgcgtggagctggccgggctc
atgacccacagcgtgctcaatctggccatcaaatacgcctcccgctcccgcaggctcaac
ctggcccagctcctcagtgaggtggctgtggaaaaagcctcagagctggcagcagcacag
caggaggaggaggaggaggaggaggaagaggatttccgaaagcgctcgagcgctggcagc
tctgccaccaagtgggggcagctgccaggcaggaatgttcagcaggaccaagaagtggaa
gatgaagaagaaactgatgcctgtgaggaagcagaagaaatcccagaagtgcatcaagag
aaagagccaaatggtttctccaaaggtgtcacttcagctgaggtgactactccaaagcct
gctctggttgcatccagcagcagaggacgggtgaatccatttaaggtggcatccagcaaa
aaggagccagtggtcccctcaggaaatgttttggacaatatgaccaagtattcaaagaaa
acatcttcatctggcagtcgagctgcagacaagcagaaccctccagttataaagcctctg
actcccaaacccaagaccaagcaggcttcagctgcctccttcttccagccccgcacacct
gcatctaatcctagggaaaaaacagtggaagaaagagaagaaaaagcaggaaatgagtcc
caggaagccaaagtcactgcacaggaaaacactgaaaacagaagaccaaggacaggtttc
cagatgtggctagaggagaacagagcaaacattttgacagataatcctgatctgaatgaa
gcagaggtaataaaagaaggaatgagtcgatttagaatgctgacatcagaggaaaggatg
gtgtggactgagaaagcaagaggaggaagagtcaatgactcagcagaagacaaaaagagg
aagcgccccccagctgatgaggatgaggtgaagaagagccaggagcagaaatctgaggac
acaaatgtatccaaaaaatccaagcctttagatccatccacaaacaacagattgtcagct
tttgccttcaagcagagctga
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