Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449296
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Entry
135449296 CDS
T09958
Symbol
TIAL1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135449296 (TIAL1)
03041 Spliceosome [BR:
zle03041
]
135449296 (TIAL1)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135449296 (TIAL1)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135449296 (TIAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
135449296
NCBI-ProteinID:
XP_064572157
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All DBs
Position
6:5446525..5464073
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AA seq
371 aa
AA seq
DB search
MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFG
KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK
STQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG
YSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYG
NPQQYGQYMANGWQVPSYGMYGQAWNQQGFGVDQSPSAAWMGGFGAQPAQGQGAPVIPNQ
AGYGMASYQTQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgggcagcccaggaccctctatgtaggaaacctgtccagagatgtgact
gaggttctcatacttcagttattcagccagattggaccatgcaaaagctgtaaaatgata
acagagcatacaagcaatgacccttattgctttgtggaattttatgaacacagagatgca
gctgctgcattagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaac
tgggcaacaacaccaagtagccagaaaaaagatacatccaatcacttccatgtgttcgtt
ggggatttaagtccagaaataacaacagaagacatcaagtcagcatttgctccttttggt
aaaatatcggatgcacgggtagttaaagatatggcaactggaaagtcaaaaggctatggt
tttgtatctttttataacaaactggatgcagaaaatgctattgtacacatgggaggccag
tggttgggaggccgccagatcagaactaactgggcaacaaggaaaccaccagcccctaaa
agtacacaagaaaataatacaaaacagttgagatttgaagatgtagtaaatcagtcaagt
ccaaaaaattgtactgtgtactgtggaggaattgcctcggggctaacagatcagcttatg
agacagactttttcaccctttggacagattatggaaataagggtgtttccagaaaaaggt
tactcatttgtcaggttttcaacccatgaaagtgcagcacatgctattgtttcagttaat
ggaaccacaattgaaggacatgttgttaaatgttattggggtaaagaatcccctgatatg
actaaaaacttccagcaggtggattacagtcagtggggacaatggagccaagtatatgga
aacccacaacagtatgggcaatatatggctaatgggtggcaagtaccatcatatggaatg
tatggccaagcatggaatcaacagggttttggagtagaccaatctccatctgctgcctgg
atgggtggatttggtgctcaacctgcccagggccaaggtgctcctgtaatacctaaccaa
gctggatatggtatggcaagctaccaaacacagtga
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