Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449341
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Entry
135449341 CDS
T09958
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04110
Cell cycle
zle04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135449341 (SMC3)
04114 Oocyte meiosis
135449341 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135449341 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zle00535
]
135449341 (SMC3)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135449341 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
135449341 (SMC3)
Proteoglycans [BR:
zle00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135449341 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
135449341
NCBI-ProteinID:
XP_064572301
LinkDB
All DBs
Position
6:complement(9862885..9886780)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctccaaacacaatgtcattgtggggagaaatggatctggaaaaagcaac
ttcttttatgcaattcagtttgtcctcagcgatgagtttagtcatcttcgcccagagcag
agactggctttgttgcatgaaggaacaggtcctcgagttatttcggcatttgtggagatt
atatttgacaattctgacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagattgaagttgctaaga
gaagtagctggtaccagagtgtacgatgaacgtaaagaggagagtatttcactaatgaaa
gaaacagagggcaagcgagagaaaatcaacgagttgttgaagtacattgaggagcgactg
catactctagaagaggagaaagaggagctggcacagtaccagaaatgggataaaatgagg
agagcattggaatacaccatttataatcaggaacttaatgaaactcgagctaagcttgat
gagctttctgctaaacgagagacgagtggagaaaaatcaaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagagcggcaagttcgagaactgaagacaaag
atttctgcaatgaaagaagagaaggagcaacttagtgctgaaagacaggagcagattaaa
cagaggactaaattagagttgaaggcaaaagatctacaggatgaattagctggcaacagt
gagcaaaggaaaagactactaaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaattggcagaaacagagccaaaatttaacagcgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacacaagaaagaacagatctctatgcaaagcaaggt
cgagggagccagtttacttccaaagaggagagggataagtggataaagaaagagctgaag
tccttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggacttg
gaggatacagaggcaaacaaggagaaaaacttggagcagtacagtaaactggaccaggat
ctcaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagtgaaagaaattacctatggagagaagagaatgcagaacaa
caagctcttgctgcaaaaagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggaatagacagcataaacaaagttttggagcacttccgt
cggaaaggcataaaccagcacgttctcaacggctatcatggaattgtgatgaataacttt
gaatgtgagccagcattctacacctgtgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgattagtaaactgagatacaatccaagatttgat
aaagctttcaaacatgtttttgggaagactttaatttgtcgtagcatggaagtgtctact
cagctggccagagctttcacaatggattgtatcactctggaaggtgaccaggtcagccat
cgaggtgctttgactggaggttattatgacaccaggaagtctcggcttgaattgcaaaaa
gatgttagaaaagcagaagaggaacttggtgaactcgaagcaaagctcaatgaaaactta
cgtagaaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgaaacacagcagagaaaattcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaaaaggcagcagtctgaaaagacatttatgcctaagcaacgtagcctg
cagagcctggaggcaagtttgcatgccatggagtcaaccagagaatcgttaaaagcagag
ctgggcacggatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaatccgacagctgcagcaagaaaacagacagcttttgaatgagaggattaaa
ttagaaggcattatcacaagagttgaaacatacctcaatgagaatctgagaaaacgcttg
gaccaagtggagcaagaactgaatgagcttcgagagacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaggataccctggcacggtca
gatgatctggataactctattgacaaaacagaagcagggattaaagaacttcagaagagc
atggaacgctggaagaacatggagaaggagcatatggatgctattaaccacgatacaaaa
gaacttgaaaaaatgacaaacaggcaaggcatgctcctcaagaagaaagaggaatgcatg
aagaaaatacgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaagctggagcagtgcaatactgaactgaagaaatacagt
cacgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggaactggacaggggctacaaatccatcatggagctgatgaatgtc
cttgagctcaggaaatacgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccaaaagttagtacctggtggcaaggccacattggtgatgaagaaagga
gatgtggaaggcagtcagtcccaggatgaaggtgaaggcagtactgagagcgaaagggga
tctggatctcagagcagtgttccatctgtagatcagttcactggagttggcataagggta
tcattcacaggaaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tctttagtggccctggccctaatatttgccatccagaaatgtgatccagctccgttctac
ttgtttgatgaaatcgaccaagccttggatgcccaacatagaaaagctgtgtcagatatg
attatggaactagctgaacatgctcagtttattacaacaacttttaggccagagttgctt
gagtcagctgacaagttctatggtgtaaaattcagaaataaggtcagtcatattgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacacatggataa
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integrated database retrieval system
