Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449346
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Entry
135449346 CDS
T09958
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135449346 (MMS19)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135449346 (MMS19)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135449346 (MMS19)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
135449346 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
API5
MIF4G
Motif
Other DBs
NCBI-GeneID:
135449346
NCBI-ProteinID:
XP_064572314
LinkDB
All DBs
Position
6:complement(13944364..13959406)
Genome browser
AA seq
1027 aa
AA seq
DB search
MAAAGAEALAASVRDFVSGQQDGRAAEVAAGVKDGRWTVLQLVEALGFSLENTDPRMRGR
GIQLLSQVLLQCYSLLQEKEVLHLVLFYESRLQDNHLVIPSVLQGLRALSMCEVLSPGLA
VSVLKAIFQEVHVQSLLQLDRHTVYSIITNFMSTREEELKGLGANFTFGFIQVMDGEKDP
RNLLVAFQIVHDLIAKDYDLGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDLILSLRA
VLASTTQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLPSLWSSLRR
EVFQTASEKIETECLTALCALSACLSRSVLSSDSEDLLDSFLSSILQDCRHHLCEPDMKL
VWPSAKLLQAAAGASLRTYHRISHSVLPLLLEQYTEHTQSSQRRTILEMLLGFLELQQKW
GHVEEDESPLLSHQAPVCSVVFSALLDPSVQLQLVGIKALTVLGSLQGFLSSSNLELVVD
HLIRLALHEEDSQSSEAAMEAAGSLAPTYPKVFSGHMVPRLEEELQSEREESHHKCHSLQ
QRCLQALAAVSTHTSIVKDTVPILLQHLQKVQKGTEAKNTQDVISVCQSLHRVALQCQQD
AEGCWYFHQTVVPCLLAMAVQAAMPESTHTLPGKALLEEEVLAAMIPVISAATTHLSPEL
AAQSVSHVVPLFLDGDVSFLPQNSFPCSFQPFGDGEHLEAQRRLVALLMAFVCSLPRDVA
IPQQEWLLRELLALSCSSNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAVNRMEPSLA
EGPRRTQALTLLLWVTKALVLRYHPLSSCLTDKLLGLLGDTELGPATADGFSLLMAESPD
VLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKGLSHVLNHLPKPVLVTE
LPTLLSLLLEALSCSDRVVQLSTLSCLHPLLLEAPQIMSLHVDTLVTKFLNLTSSPTMAV
RIAALRCAHALTSLPTTVLLPYKGRVIRALAKPLDDKKRLVRKEAVAARGEWFLLGSPGR
AQECPEC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccggggcggaggctctcgccgcctccgtgcgggactttgtgtccgggcag
caggacggccgtgctgcggaggtggcggcaggggtgaaggatggaaggtggacggtgctg
cagcttgtggaagccctggggttttccctggagaacacagatcctcggatgcgagggcga
ggcatccagttgttgtcgcaagtcctgctccagtgttactccctgctccaggagaaggaa
gtgctgcacctggtcctgttctatgagagccggctgcaagacaatcacctggtgattccc
tcggtgctgcagggactccgggcactgagcatgtgtgaggtgctgtccccagggctagca
gtgtctgtgctcaaagccatcttccaggaggtacatgtgcagtccttgctacagctggac
cgccacacagtctacagcatcatcaccaacttcatgagcaccagggaggaagagctgaaa
ggcctgggtgccaacttcaccttcggcttcatccaggtcatggatggggagaaggatccc
cgcaatctgctggtggccttccagattgtgcatgatctcattgccaaggactatgacctg
ggtccctttgtggaggagctgtttgaagttacatcctgctacttccctgttgattttact
cctccccccaatgatcctcacggcatccagagggaagacctgatcctgagcctccgggct
gtactggcctctacaacccagtttgctgagttccttctccctctgcttattgagaagttg
gactcagagctgcaaagtgccaagcttgactcactgcagactctgactgcctgctgtgcc
atctatgggcagaaggagctgcaggaattccttcccagcctctggtcatccctgcgcaga
gaggtgttccagacagcgagtgagaagattgagacggaatgcctgactgcactgtgtgct
ctctctgcctgcctctcccgctccgtgctcagctctgattctgaggatctgctggactcc
ttcctcagcagcatcctgcaagattgcaggcaccatctgtgcgagcccgacatgaagctg
gtgtggcccagtgccaaactcctgcaggcagcagcgggcgcctccctccgcacctaccac
cgcatcagccacagcgtcctgcccctgctgctggagcagtacaccgagcacacgcagagc
agccagaggaggacaatcctggaaatgctgctaggcttcctggagttgcagcagaaatgg
ggacatgtggaagaagatgagagccctctgctgtcgcaccaagccccagtttgttctgtg
gtgttctcggcgctgctggatcccagtgtgcagctgcagctggttgggatcaaggcactg
actgtcctgggctccctgcaaggcttcctgtcttcctctaatctggagctggttgtggat
cacctcatccgtcttgctttgcatgaggaggattcccagagcagtgaagcagcgatggag
gcagctgggtccctggcccccacctacccaaaggttttctctggacacatggtacccagg
cttgaagaggagctgcagtcagagcgggaggaaagccaccacaagtgtcactccttgcag
cagcgctgcctgcaggccctggcagctgtgtccacccacaccagcatcgtgaaggacact
gtccccatcctgctacagcatctccagaaggtgcagaaagggactgaggccaagaacacc
caagacgtgatctctgtgtgccagagcctgcaccgtgtggccctgcagtgccagcaggat
gctgagggctgctggtacttccaccagacagtggtgccgtgcctgctggccatggctgtg
caggcagccatgccagagagcacccatacactgccaggcaaggcactgctggaggaagag
gtgctggctgccatgattccagtcatcagtgctgccaccactcacctgagccccgagctg
gctgcccagagtgtgtctcatgtggtgcccctctttctggatggagatgtctccttctta
ccccaaaacagttttccctgctccttccagccttttggggatggggagcacttggaggca
cagagacgcctggtcgccctcctcatggccttcgtctgctccttgccccgcgatgtggca
atacctcagcaggaatggctgctccgggagctgctggcattgagctgttcctccaactgt
cccttcacggccaccacagctgccaagtgctttgcagggctggtgaacaagcacccagca
gggcagcagctggatgaaatcctgcagcttgcagtgaataggatggagcccagccttgcg
gaggggccccgccgaacacaggcactcaccctgctgctctgggtgaccaaagccctggtg
ctgcgctaccaccccctgagctcttgcctgacagacaagctgctgggcctgctgggtgac
acggagctgggccctgccacagccgatggcttctccttgctcatggccgagtccccggac
gtgctgcacaagggctgccatgctgacgtgcgcatcatgttccgccagcgcttcttcact
gacaacgtccccaagctggtgcaaggcttccatggggctggccccgatgtgaaggccaat
tacctgaagggcctgtcccatgtgctcaatcacctccccaaacctgtgctggtgacagag
ctgcccacgctgctttccctcctgcttgaggccctgtcctgctcagatcgtgtagtacag
ctctccacactgagctgcctccacccactgctgctcgaagctccccagatcatgagcctg
catgtcgacacactggtcaccaagttcctcaacctcacctccagtcccaccatggctgtc
cgcatcgccgccctgcgctgtgcccatgcccttaccagtctgcccacaacagtgctgctc
ccatacaagggccgagttatccgggcattggccaagcctttggatgacaagaagaggctg
gtgcggaaggaagcagtggcagcacgcggagaatggttcctgctcgggagcccaggcaga
gcccaggagtgccctgagtgctag
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