Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449429
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Entry
135449429 CDS
T09958
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135449429 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135449429 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135449429 (PDLIM1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135449429
NCBI-ProteinID:
XP_064572496
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Position
6:complement(19695513..19739735)
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AA seq
327 aa
AA seq
DB search
MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRSEAKVWSPLVSEEGKTHPYKMNLASEPQEIKHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQSFNSAVETKTSPGALEPSKPLDQHN
QTPGSIAIDKQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVG
EQIYCEKHARERVIPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctccagggtgactccaggcagcaaagctgca
atagccaacttgtgtataggagaccagatcatagccatcgatggagtgaacacagacaac
atgacacaccttgaggcacaaaacaaaatcaagggctgcacggatgagctgaccctgaca
gtcagcagatcggaggcaaaagtctggtcaccacttgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgagccacaggaaataaagcacataggaagtgcacac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagtccttcaacagcgcg
gtggagacaaaaacatctcccggggccctggagccttccaagcctttagatcagcataac
cagaccccaggcagcattgccatagacaaacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtctgcttcatttcttgtgttgcaagagatc
ttggagtcagaggagaaaggagaccctaccaaaccatctggatttaggagcgtcaaggcc
cctaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgtgacaag
tgtggatctggcattgtagggatgtttgtgaagatccgggacaagcagcgccaccccgag
tgctacgtgtgcagcgactgcggcaccaacctcaagcagaaaggacacttctttgtggga
gagcagatctactgcgagaagcacgcgcgggaacgggtcattccccccgagggctacgag
gtggtcaccgtcttcccaaagtaa
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