Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449495
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Entry
135449495 CDS
T09958
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135449495 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135449495 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135449495 (NFKB2)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
135449495 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
135449495
NCBI-ProteinID:
XP_064572633
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All DBs
Position
6:complement(19227302..19237912)
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AA seq
969 aa
AA seq
DB search
MLGLNGLLRPTSSSSAGGRPRADMDEQFQPVSAARIGAERPGRVSCLLPAPELGTGQCPT
PRAGWECLDGIDYDDFSFDSHMMEQKEPLMETAEGPYLVIIEQPKQRGFRFRYGCEGPSH
GGLPGASSEKGRKTYPTVKICNYTGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVT
IVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSRLLTEVELREIELEAKELK
KVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRG
GDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRP
VTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGG
AGGFGSGGGGNLSFPYSSGLTYNSIYSPGPHPVGSYQGGVQMKGPEAEGPESDRQAPAEE
STYCKELQKHAQLCQLRMLALARCNARALLDYSVTADPRMLLAVQRHLAASQDENGDTPL
HLAIIHEQTAVIKQLIDIIVSIPSQQIINISNNLQQTPLHLAVITKQPQVVQLLLQARAD
PTLLDRYGNSLLHLALQTGNEEMLRTLLAHLGSAAPYLLRLPSFRGLLPVHLAVKEKSLA
CLDLLVRTGADVNAVERQSGRTPLHLAVEMENLNMATHLVKKLGADINSRDFAGNTPLHL
AAGLGSPTLTKLLLKAGADVLCENDEPMSLSSSEASSDTDTDPEEQELAMDLGEPALAAE
PSTSSKLFRQGHWQAGHRQRRCHTSLDLTRSQKVREILLQASQQGPKAELPTAPQPGKVL
SLDSEALQGLEQLLNRDCSGSDWIELAKRLGLCSLVETYKDTPSPSASLLRSYELAGGSL
GGLLEALDSMGLHNAVRMLHKTEALEKLQSTELKEDSAYGSESVEEEQAPTLALKPGGEL
PPSQQPQVH
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctgaacgggttgctgagaccaacctcttcctcctcggccggcggccggccc
cgcgccgacatggacgagcagttccagcccgtgagtgcggcacggatcggagcggagcgg
cccgggcgcgtgtcctgcctgctgccggccccggagctgggcacggggcagtgcccgacc
ccacgggcggggtgggagtgcctggatgggattgactatgatgacttcagttttgactcc
cacatgatggagcagaaggagccactgatggagacagcggaaggtccctaccttgtcatt
attgagcagccaaagcagcggggtttccgatttcggtatggctgcgagggcccttcccat
gggggcctgcccggagcatccagcgagaagggacgcaagacctatcccactgtcaagatc
tgtaactacacagggatggcccggatcgaggtagacctggtgacacacagtgaccctccc
cgtgtccatgcccacagcctggtgggcaagcagtgcaacgaggctggcaactgtgtcacg
atcgtgggacccaaggacatgactgctcagttcagcaacctgggtgtgctccatgtcacc
aagaagaatatgatggagatcatgaaggaaaagctgaagcagcagaagatgcgtaacagg
agccgtctgctgacggaagtggagctgcgtgagatcgagctggaggcaaaggagctgaag
aaggtgatggacctgagcattgtgcggttgcgcttcaccgcctacctccgcgacagcagt
ggcaacttcacgctggctctccagcctgtcatctctgaccccatccatgacagcaagtcc
cccggagcttccaacctgaagatctcacgaatggataaaacagcaggctctgtgcgggga
ggagacgaagtctacttgctgtgtgataaagttcagaaagatgacattgaggtgcgtttc
tacgaggatgatgagaacggctggcaggcctttggggacttttctcctacagatgtgcac
aagcagtatgccattgtcttccgcacgcccccctaccacaagcccaagatcgaccgtcct
gtcaccgtcttcctgcagctgaagcggaagcggggaggcgacgtgagtgactccaagcag
ttcacctactacccagtggtggaagataaggaagaagtggagaggaagcgcaagaaagtc
ctgcctcagtttcctcagcactttggcggtggctcgcacatggggggggccggcgggggg
gccgggggctttggctctggaggaggtgggaacctcagcttcccatactcctctgggctg
acctacaacagcatctactcgcccggcccccacccagtggggagctaccaggggggtgtg
cagatgaagggccctgaggcagaggggcctgagagtgacaggcaggcacctgcagaagag
agcacatactgcaaggagctgcagaagcacgcccagctgtgccagctgcggatgctggcg
ttagcccgttgcaatgcccgtgccctgctcgactactcggtcaccgccgacccccgcatg
ctgctggcagtccagaggcacctggctgcgtcacaggatgagaacggagacacgcctttg
cacctcgctattatccatgaacagacagctgtgatcaagcagctgattgacatcattgtt
agcatccccagccagcagatcatcaacatctccaataacctgcaacagacgccactgcat
ctggcagtcatcaccaagcagccccaagtggtccagctcctgctgcaagcccgcgccgac
ccaaccttgctggaccgctatggcaattccctgctgcacctggcactccagactggcaat
gaagagatgctgaggacactgctggctcacctgggctcagctgccccttatctgctccgc
ctgcccagtttccgtggcctcctgcctgtgcatttggctgtgaaggaaaagagtttggct
tgcctggacctgctggtcaggacgggagctgatgtgaatgcagtggagaggcaaagtggg
aggaccccactgcacctggctgtggagatggagaacctgaacatggccacccacctggtg
aagaagctgggagcagacatcaacagccgggattttgccgggaacacccccctgcacttg
gctgctggcctgggctctcccactctcaccaaactgctccttaaagctggggcagatgtt
ttgtgtgagaatgatgagcccatgagcctgtcttcgtcagaggccagtagcgacacagac
actgaccctgaggagcaggagctggccatggatctgggggagccagccctggctgcagag
cccagcaccagctccaagctcttcaggcaggggcactggcaggcagggcaccggcagcgc
cgctgccacacatccctggacctgactcggagccagaaggtgcgggagatcctgctgcag
gcctcccagcaggggcccaaggcagaactgcccactgccccccagccagggaaggtcctg
tcactggacagtgaggcactgcaggggctggagcagctgctgaaccgggactgcagtggg
tcagactggatcgagctggccaagcgcctggggctgtgcagcctcgtggagacgtacaag
gacacgccctcgcccagtgccagcctcctgcgcagctacgagctggcaggtggcagcctg
gggggactgctggaggccctggactccatggggctgcacaatgccgtgaggatgcttcac
aaaactgaggcactggagaagctgcaaagcacagagctgaaggaagacagtgcctatggc
agtgagtcggtggaggaggagcaggcgcctacactagccttgaagccagggggtgagctg
ccccccagccagcagccacaggtgcactga
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