Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449554
Help
Entry
135449554 CDS
T09958
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zle03016
]
135449554 (TRUB1)
Enzymes [BR:
zle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
135449554 (TRUB1)
Transfer RNA biogenesis [BR:
zle03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135449554 (TRUB1)
Prokaryotic type
135449554 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
135449554
NCBI-ProteinID:
XP_064572761
LinkDB
All DBs
Position
6:complement(7717124..7744193)
Genome browser
AA seq
287 aa
AA seq
DB search
MAGEAGGAALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTNGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELSTCASVQELTRTKQGPFTLEEH
ALHEDKWTIDEIAQSLEHCRALLLGEPARKKLKTEHPGESAVVCEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaagctcttctcgctc
agcgggctcttcgccgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaacgggaacaaaagaaatcag
gtgttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctggggactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaggtaacaaaaggagatcttgaaaatgttctgcagaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaggcagtggaagcaaagcctgctcggccagtgagagtg
tacagcctttctctgcagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctccacc
tgtgcgtcggtgcaggagctgacgcgcaccaagcagggcccgttcacgctggaggagcac
gccctgcacgaggacaagtggacaattgatgaaattgctcagtccctggagcactgcaga
gctctgctcctgggagagccagctcggaaaaaattgaagacagagcatcctggtgaatct
gctgtggtctgtgaggataagtga
DBGET
integrated database retrieval system
