Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449594
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Entry
135449594 CDS
T09958
Name
(RefSeq) core histone macro-H2A.2
KO
K11251
histone H2A
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03082
ATP-dependent chromatin remodeling
zle04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135449594
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
135449594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135449594
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135449594
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
135449594
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135449594
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Clp_N
DUF1764
Motif
Other DBs
NCBI-GeneID:
135449594
NCBI-ProteinID:
XP_064572827
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All DBs
Position
6:complement(33042561..33066720)
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AA seq
372 aa
AA seq
DB search
MSGRSGKKKMSKLSRSSRAGVIFPVGRMMRYLKKGTYKYRIGVGAPVYMAAVIEYLAAEI
LELAGNAARDNKKGRIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIQPELLAKKRGA
KGKTETILSPAPEKKGRKSMVNKKSGKKAKSTKARTSKKNKQKDNEKEGASNSTTEDGPG
DGFTILSSKSLVPGQKLSLTQSDISHIGSMKVEGIVHPTTAEIDLKEEIGKALEKAGGKE
FLETVKELRKSQGPLEVAEAALTQSSGLAAKFVIHCHIPQWGSDKCEEQLEETVKNCLTA
AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLRAISSHFDGSSSSSLKNIYFLLFDSESIG
IYVQEMAKLDTK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcggagcgggaagaagaaaatgtccaagctgtcgcgctcgagcagggccggg
gtgatcttccccgtgggcaggatgatgcgctacctgaagaaaggcacctacaagtaccgc
atcggggtgggggcgcctgtctacatggctgctgtcattgagtacctggcagctgaaatc
ctggagctggcaggaaacgcagcgcgggacaacaagaaaggaaggattgcccccagacac
atcctcctggcagttgcaaatgatgaggagctgaatcagctgctcaaaggtgtgactatt
gcaagtggaggtgtcctgcccagaattcagcctgagcttctagccaagaaaaggggtgcc
aaaggcaaaactgagaccatcctttcccctgctcctgagaagaaggggaggaaatccatg
gtgaacaaaaagagtgggaagaaggcaaagtctaccaaggcccggacgtccaaaaagaac
aaacaaaaggacaatgaaaaagaaggagcttcaaattcaacaactgaagatggacctggg
gatggtttcactatcttgtcctccaagagccttgtgccaggacagaagctttctctgaca
cagagtgacatcagccatattggctccatgaaagtagaaggaattgttcaccctacaact
gctgaaatagacctcaaggaggaaataggcaaggcactggaaaaggctggaggcaaagag
ttcttggaaacagtgaaagagcttcgcaaatcccaaggacctttggaagttgctgaagct
gcactcactcagtctagcggcctagcagcaaagtttgtcatccactgtcacatcccacag
tggggctcggacaagtgtgaggagcagctcgaggagactgtcaagaactgcttaacagct
gcagaagacaagaagttgaaatctgtggctttccccccgtttcccagtggcagaaactgc
ttcccaaagcagacggcagcccaggtgaccctcagagccatttccagccactttgatggc
agcagctcttcctccttgaagaacatttactttctgctcttcgacagtgaaagcattggc
atctacgtgcaagaaatggccaagctggacacgaagtag
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