Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449631
Help
Entry
135449631 CDS
T09958
Symbol
LRIT1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135449631 (LRIT1)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
135449631 (LRIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
fn3
ig
Ig_2
Motif
Other DBs
NCBI-GeneID:
135449631
NCBI-ProteinID:
XP_064572889
LinkDB
All DBs
Position
6:complement(26018467..26028613)
Genome browser
AA seq
626 aa
AA seq
DB search
MRLAVTLLCCWALAGLPRAAGSCPSQCSCAFHSLGDGTKARTVLCNDPEMTLPPVNIPVD
TSKLRIEKTAIRRVPGEAFHLLHNLEYLWMPYNSLGSLSSITFKGLRRLQELRLDGNNLI
SFPWESLAGMPQLRLLDLHNNELTSVPPDAARYVRNITYLDLSSNKLMTLPQALIATWAN
LQAVPYFPNDNSKIILGLQDNPWVCDCSLYEMVHFLNFQSPNIAFIEPRLKCFTPRSLAG
VFFSQVELRKCQSPVVHTSVAKVKTILGSTVLLRCGTTGVPIPELSWRRADGAQLNGTVH
QEISSDGMSWSILGLPVVSYLDSGEYICKAKNFLGATEAFISLIITDSESTDDPNSSAKG
TWNGKASGMEAAAYNDKLVARYVITTSTVPTLGAGAGTGDSILLPDTAQDSNPQNLLVSP
TTGQQEPERMVRSVRVIGDTDQSITLAWKAPMAKNTTVFSVLYAVFGERDMRRINVEPGK
TKVTLYGLLPKTKYIVCVCVKGLIPRKEQCIIFSTDEVVSAGGTQKLINVVVISVACVIA
VPLTLVVCCGALKRRCKKCFVRKPKDAQESYVTFESLSPGAKAKGVEGEYLTRHTPDESN
RLLSARSSVDSEAIPKIEGQPNEYFC
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggcggtgactctgctgtgctgctgggcgctggcggggctgccccgcgccgcc
ggctcctgcccctcgcagtgcagctgcgccttccacagcctcggcgacggcaccaaggcc
aggacagtgctgtgtaatgacccagagatgaccctccctcctgtgaacatccctgttgat
acaagcaagcttcggatagaaaagacagcgatccgcagggtgccaggagaggctttccac
ctgctccacaacctggagtacctctggatgccctataactccctgggcagcctcagcagc
atcaccttcaagggccttcgtcgtctgcaggagctgaggctggatgggaacaacctgatc
tcattcccctgggagagcctggctggcatgccccagctgaggctcctggatttgcacaac
aacgaactcacctcagtccccccagatgctgctcgttatgtcaggaacatcacatacctg
gatctgtccagcaataagctgatgactcttcctcaggctctcattgccacctgggccaac
ctccaggctgttccctacttccccaatgacaactccaagatcatcctaggtttgcaagac
aatccttgggtgtgtgactgcagtctgtacgaaatggtgcatttcctaaatttccagtct
cctaacatagccttcattgagcccaggctgaaatgcttcacccccaggagccttgcagga
gtcttcttcagccaggtggagctgaggaagtgccagagccccgtggtgcacacgtctgtg
gccaaggtgaagaccatcctgggcagcacggtgctgctgcgctgcggcaccacgggcgtg
cccatccccgagctcagctggaggagagctgatggggctcagctgaatggcacagttcac
caagagatttccagtgatgggatgagctggtctatcctgggcctgcctgtagtctcttac
cttgactctggagagtacatctgtaaagcaaagaatttcctgggggcaacagaggccttc
atctcgctcatcatcacagactcagaaagcacggatgaccctaactctagtgccaaaggc
acgtggaatggcaaggccagcgggatggaggcagctgcctacaatgacaaactggtggcc
aggtacgttatcaccacctccaccgtgcccacgctgggggctggggcgggcaccggagac
agcatcctcctcccggacacggctcaggacagcaacccccagaacctgctggtgagcccc
accacgggccagcaggagccagagaggatggtgaggtctgtcagggtcataggggacacg
gaccagagcatcaccctggcctggaaggcgcctatggcaaagaacaccacggtgttcagc
gtcctttacgccgtctttggggagagggacatgcggcggatcaacgtggagccaggcaag
accaaggtcactctgtacgggctgctgccaaagaccaagtacatcgtgtgcgtctgtgtg
aaagggctgatccccaggaaggagcagtgcatcatattttccacagacgaagtggtcagt
gcaggagggacgcagaagctcatcaatgtggttgtcatcagcgtggcctgtgtcattgct
gttcctctgaccctggtggtctgctgcggagccctgaaacggcgctgcaagaaatgcttt
gtgcgcaagcccaaggacgcgcaggaatcgtacgtcaccttcgagagcctgtcccctggg
gccaaggccaagggcgtggagggagagtacctgaccaggcacacccctgacgagtccaac
aggctgctctccgcccgctccagcgtggactcggaagccataccaaagatagagggacag
cccaatgaatacttctgctga
DBGET
integrated database retrieval system
