Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449675
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Entry
135449675 CDS
T09958
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135449675 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135449675 (ERCC6)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135449675 (ERCC6)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135449675 (ERCC6)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135449675 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
135449675
NCBI-ProteinID:
XP_064572958
LinkDB
All DBs
Position
6:17431884..17475943
Genome browser
AA seq
1509 aa
AA seq
DB search
MKSFLCVRVLMIVPFFFVAFEQRMPTHKSDPPDSVQEPESATASSNDCLHNDEDLGAEQE
NGICDNGVGNSTAVPNSDCQASTSMAVPLEVPRRGHPLLQINRQQIQSVSCSAHAAELKD
LGVDVYDQDVLEQGVLQQVDNAINEATKAAKIANASKEYESVLEDLRSCTTSLRHINKII
EELSPQAADNKNVNRKLDSVKRQKYNKEQQLKKIKAKQKRLQGILGLTDFADEANEIEYE
EDEEPGPSSLGSMLMPAQETEWAELIRTGQMTPFGTKIPQKPERKARQLRLNETSDFEKY
LADQAKLSSERKKLSRHKGAKKKAQAKNVQCVAPAAATKEKSGKALSKTDKRLKKHLREL
QKHALQIHSKARIPKEQKYLEAKKCRLEQEDDSGESEYVPDEELLDPEAAEEEEEQASSL
AENDSDYELKSLSRKRVKKSFEEAKNDADYVPSSEEEEHTPGKHKVRRWRDDGDVDYYKQ
RLRKWQKERLKDKEHQTAEELSEESDVEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQ
QAGGILGDEMGLGKTIQIIAFLAGLSYSNMRTRGSNYRYQGLGPTVIVCPATVLHQWVKE
FHTWWPPFRVAVLHETGSYTKSKVKLIHEIASCHGILITSYSYIRLMQDNIHTYDWHYVI
LDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFM
EQFSVPITMGGYCNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVL
FCRLTEEQRQIYQNYINSKEVYQILNGDMQILLGLSTLRKICNHPDFVADSPRLLKSVPD
AEAEDPNQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYL
RMDGTTAVASRQPLVTKYNEDKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVDTQ
ARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQNRFFKSNDLYE
LFTLNSPDVSQGTETSAIFAGTGSDVQVPKPPANGTSKCDVHLAESSSHKKKKSSNSHST
THMKDSSSKAIETSEETKGTLEAFDQNSYTKDNAQAAADTNSLNESKEECLESDDKYMSQ
SVPCSAGSAENAEGLTAVVAGEGCGAANADARTDLSLTCDAAGSWEKQDAKTEDGQFDNN
HFKCISKTKHKVDVLSHESHRDKSKKKHHKDGKFEGKRIPHLVKQKQYRRENSEEQDSKK
NDDYVLQKLFKKSGVHSVMKHDAIMDASNADHVLEEAEANRVAQDALRALRLSRQQCLGA
ASGVPTWTGTSGLSGAPSGIKSRFGQKRNSMLLSSHSTCTSASKKQKDGDTIKKQNIKKS
SSSEHFSGRSGESSSSALDSSSLLARMRARNHLVLPQQTRDEGDENHQPAAAPVPGSTEY
DELLVDLRNFLAFQARVDGEASTRELLQEFESKLPAEHSCVFRELLRNICTFHRSPNGEG
VWRLKPEFR
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctttttatgtgttcgtgttcttatgatagtgcccttcttctttgttgccttt
gagcagaggatgccaacacacaagagtgacccgccagacagtgtccaggagccagagtct
gccactgcttcaagcaatgattgcctgcacaatgatgaggacttgggagctgagcaggaa
aatggcatttgtgacaacggtgtgggtaacagtaccgcagttcccaactctgactgccag
gcttccacttccatggctgttcctttggaggtgcccagaagaggacatccccttttacag
atcaacaggcagcagattcagtctgtctcatgtagtgcacatgctgctgagctcaaagat
ttaggagttgatgtctatgaccaggatgtgttggagcaaggagttcttcagcaagtagat
aatgcaattaatgaagcaactaaagcagcaaaaatagctaatgcatcaaaagaatatgag
tcagtactggaggatttgagatcatgtacaacatctctgagacatataaataaaattatt
gaggaactttcacctcaagctgctgacaacaaaaatgttaacagaaaactagattctgtg
aaacggcaaaaatataacaaggagcaacagctgaagaagataaaagcaaaacaaaaacgt
cttcaaggaatacttggtttaacagactttgctgatgaagcaaatgagattgaatatgag
gaagatgaagaacctggtccatcatcccttggcagcatgcttatgcctgctcaggaaaca
gagtgggcagagctcatccgaactggtcagatgactccatttggaactaaaatacctcag
aagccagagaggaaggcacgacagttaaggctaaatgaaacatctgattttgagaagtac
ttagcagaccaggctaaattgtcctctgaaagaaagaagttatcccgtcacaagggagca
aagaagaaagcacaagccaaaaatgttcagtgtgtggctcctgcagctgccacaaaggag
aaaagtggtaaagccctctcaaaaacagataagcgtttaaaaaaacacttgagagagctt
cagaagcacgcccttcagattcattccaaggccaggattccaaaggaacagaaatacctt
gaggccaagaagtgcaggcttgagcaagaggatgatagtggggagtctgagtacgtacct
gatgaggagctcttggatccagaagcagcagaagaggaagaagagcaggcatcttctctt
gctgagaatgattctgattatgaacttaagagtttatcaagaaaaagggtaaagaagagt
tttgaagaagctaaaaatgatgctgattatgttccaagctctgaggaagaggagcataca
ccagggaagcacaaagtgagacgatggagagatgatggagatgtggactattataaacag
agactaaggaagtggcaaaaagaacgtttgaaggataaagaacatcaaacagctgaggaa
ctttctgaagaaagtgatgttgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagctttttaagtaccagcagacaggtgttaggtggctttgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccattcagataattgcc
ttcttggcaggtctgagctacagcaatatgaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtctgtccagctactgtgttgcatcagtgggtaaaagaa
ttccacacttggtggcctccatttagagttgctgtgctccatgaaactggttcttataca
aagagtaaggtgaaattaattcatgaaattgcttcatgccatgggattttaattacatct
tactcgtacattcgtctgatgcaagacaacatccacacatatgattggcactatgtcatt
ctggatgagggtcacaaaatccgaaatccaaatgctgcagtcacacttgcatgcaagcag
ttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataacctaaaggag
ctctggtccctctttgactttatattcccaggaaaattgggaaccctccctgtgttcatg
gagcagttttctgtcccaataaccatgggaggatattgcaatgcctctcctgtccaggta
aaaactgcatacaagtgtgcctgtgtgttacgggacaccataaacccctacttgctgcga
agaatgaaggctgatgtaaaaatgagcctttcacttccagataaaaatgaacaggtcctc
ttttgccgtttgacagaggagcagcgtcaaatctatcaaaattacatcaactctaaagaa
gtttaccagattctcaatggagacatgcagattctcttaggactatcaactttgagaaaa
atttgcaatcaccctgactttgttgctgatagtcccagacttctgaagagtgtgccagat
gctgaagcagaggatccaaatcagtttggatattggaaacgttctggaaaaatgatagtg
gtagaatccttgctgaaaatatggcacaagcaaggtcacagagtattgttttttactcag
tcaagacagatgatgcagatacttgaagtctttgtgagatacagaaactattcctacctc
aggatggatggcaccacagcagtagcttccagacagcctcttgtaacaaaatacaatgag
gacaaatccatatttctttttcttctaacaactcgtgttggtggcattggagttaacttg
gttggtgctgaccgggttattatttatgatcctgactggaatcccagtgtagacacacag
gctcgggaacgtgcttggaggataggccagaagaaagaggtgactgtgtataggctgctc
actgcagggaccattgaggagaagatataccacagacaaatcttcaaacagtttttaaca
aacagagtgctgaaagaccctaagcagaatcgcttcttcaaatccaatgacctttatgaa
ctatttactctgaacagcccagatgtgtctcaggggacagaaacaagcgcaatttttgca
ggtactggttcagatgttcaagtcccaaagccacctgctaatggcacttctaaatgtgat
gtccatcttgcagaaagcagctcacacaagaagaagaaatcctccaattcccattccacc
acacacatgaaagattcttcatctaaagcaatagagacaagtgaggaaaccaagggaacc
ttggaagcctttgaccaaaatagctacacaaaagataatgcacaagctgctgctgataca
aattccttaaatgaaagcaaggaggaatgcttggaaagtgatgacaaatacatgtcccag
tcagtgccatgcagtgcagggtctgcagagaatgcagaaggtctgactgctgtggtggct
ggtgagggatgtggtgcagctaatgcagatgccaggacagatcttagcctcacttgtgat
gcagctggctcttgggaaaagcaggatgctaaaactgaagatgggcaatttgataataat
cattttaagtgtatctcaaaaacaaagcacaaggtggatgtgctgtcacatgagagccac
agagataagtctaagaagaaacatcacaaagatggcaaatttgaaggaaagcgcattcct
catctagtgaaacaaaagcaatacagaagggagaacagtgaagagcaggactcaaagaaa
aatgatgactatgtcttgcagaaacttttcaaaaaatcaggggtacacagtgttatgaag
catgatgccattatggatgcgtccaatgcagatcatgtgctggaggaagcagaagcgaac
agagtggcccaggacgccttgagagccctgagactctctcgtcagcagtgtttaggagct
gcttctggtgtgccaacctggacaggcacgagtggtctttcaggtgcaccatcaggaata
aagagtcggtttggccaaaaaagaaactccatgctgctttcttcacattccacttgtaca
tcagcttcaaagaagcagaaggatggagatacaataaagaaacaaaatataaagaaatct
agttccagtgagcacttcagtggaagatctggagaatcgtcatccagtgctctggactct
tcatctttattagctcgcatgagggcaagaaaccaccttgttttaccacagcagacaagg
gatgagggtgatgagaaccatcagccagcagccgccccagtcccgggttccacggagtac
gatgagctgctcgtggatctgcggaacttcctggcgttccaggcccgcgtggacggtgag
gccagcacccgggagctgctgcaggagtttgagtccaagctgcccgcagagcactcctgc
gtcttcagagagctgctccgcaacatctgcaccttccacaggagccccaacggggaaggg
gtctggaggctaaagccggaattccgatga
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integrated database retrieval system
