Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449707
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Entry
135449707 CDS
T09958
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135449707 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135449707 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135449707 (LDB3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
135449707
NCBI-ProteinID:
XP_064573026
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All DBs
Position
6:complement(26553911..26668253)
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AA seq
773 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNPGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKEPAWEINGNRTTF
SPLTNTATGPVGSVLATNGTFSGYLNQQEISLSNSSSYQKTTTVRSSMSSQSVTPDISPA
KSSLGSKASPAWAGGSSPAHQLSPARQYNNPIGLYSAETLREMAEMHKLSLNRRASEGGL
PRGTDFTERFNPNVLKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAG
QAQAQGGEFAGALPIKDPHVDSASPVYQAVLKTQNKPEDDSEDWSRRSANLQSKSFRILA
QMTGTEYMQDPDEEALRRSRDKENLAAASENSTPVEHAPVAPSSAAPAPHASAPQPAPAA
PSTASLMAAPATTSVVQEAFSSSFQSFNRHSSTSITYQSKQRNTTQSYTPMPVSGGYSES
PAPSAASKTRVVTTASIKPSVYQPAPAPVHSYTPANTEPASRPPWVTDDSFSQKFAPGKS
TTTVTKHILPRGAPVLSPTTIPAYPSPVSPPSQPPALARGTVQRAERFPASSRTPLCGHC
NSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCH
TKIMGEVMHALRQTWHTSCFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDY
PVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagtgtgactctgaatggacctggaccctggggcttccgactgcaagggggc
aaggacttcaacatgcccctgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaacccaggggaccttgtcgtggccattgatggagtcaacactgacagcatg
acccacctggaggcccagaacaagatcaaatcagccagccacaacctgagcctcactctg
cagaaatctaaacgtccagtgccagtttcaaccacagctcccagaattgactctcccagg
gctgtaattccccatcagaaggaacctgcttgggaaatcaatggcaacagaacaaccttc
agccctctaactaacacggcgactgggcctgtgggtagtgttttagcaaccaatggaacc
ttttcaggctacctcaaccagcaagagatcagcctttcaaatagctcttcctaccaaaag
actaccacagttagatcttccatgtcctctcagtctgtgactcctgacatttcacctgcc
aagagctcgttaggttccaaagcaagccctgcttgggctggtggcagtagccccgctcac
cagctgagccctgcaaggcagtataacaaccccattggcctttactcggcagagaccctg
agggaaatggctgagatgcataaattgagtctcaaccgaagggcttcggaaggtggactt
cctagaggcacggacttcacggagcgtttcaaccccaatgtcctgaaggactctgccctg
tctacccacaaacccattgaggtgaagggccttggcggcaaggctaccataattcacgcg
cagtataacaccccgatcagcatgtattcccaggatgctatcatggatgcaattgcaggc
caggcacaagcccagggtggagaatttgctggtgccctccctataaaggatcctcacgta
gacagtgcctctccagtgtatcaggctgtgcttaaaacccagaacaagcctgaggatgac
agtgaggactggagccgtcgctctgccaacctgcagtccaagtccttccgtatccttgcc
cagatgactggaactgagtacatgcaagatccagatgaagaagctctgaggaggtcaaga
gacaaggaaaaccttgcagcagcatcagaaaacagtacccctgttgagcatgccccggtg
gctcccagttctgctgctcctgcaccacatgcttcagcacctcagcctgctcctgctgct
ccaagcacagccagcctgatggcagcaccagccaccacctcagtagtgcaagaggctttc
tcatcctccttccaaagtttcaaccggcattcttccacctccatcacctaccagtcaaag
cagagaaacacaacccagtcatatacaccaatgccagtttctggaggctacagcgaaagt
cctgctccttctgccgcttcaaaaacgagagttgttactactgccagcataaagccctct
gtctaccagccagcaccagcaccagttcattcctacacccctgccaacacggagcctgcg
agtcgccccccctgggtaacagatgactccttttcccagaaatttgcacctggaaaatcc
accaccaccgtcacaaagcacatccttccaaggggtgctccggtgctgtctcctaccaca
attcctgcttacccgtctccagtttcacctccttcccagccccctgccttagcccgggga
acagtgcagagggcggagcgttttccagccagcagccgaactcctctctgcgggcactgc
aacagcatcattcgaggtcctttcctggtagccatgggtcgctcttggcacccagaagaa
ttcaattgtgcttactgcaagacatccttggctgacatgtgctttgtggaggagcagaac
agtgtgtactgtgagcgctgctatgaacagttctttgcaccaacctgtgccagatgccac
actaagattatgggggaagtgatgcatgccctaagacagacttggcacacaagttgcttt
gtctgtgctgcttgtaagaagccatttgggaatagcctgttccacatggaggatggggag
ccctactgtgagaaagattacattgctttgttcagcacaaaatgtcatggctgtgattat
cctgttgaagctggagataaattcattgaagctcttggacacacttggcatgacacctgc
ttcatttgtgctgtgtgccatgtgaatttggaaggtcagccattctactccaagaaggac
aagcccctgtgcaagaagcatgcccatgccatcaatgtttag
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