Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449737
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Entry
135449737 CDS
T09958
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135449737 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135449737 (KCNMA1)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135449737 (KCNMA1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
135449737
NCBI-ProteinID:
XP_064573081
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Position
6:complement(22327034..22738106)
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AA seq
1299 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCK
ACHDDITDPKRIKKCGCKRPKMSIYKRMRLACCFDCGRSERDCSCMSGSVHSNMDTLERA
FPLSSVSVNDCSTSLRAFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQ
IDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLR
NLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNIN
LCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRTS
PDNSPVHGLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDSN
VQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP
ELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTY
NMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLS
HSSHSSYSSSKKSSSVHSIPSTANRPNRTKSRDSRDKQNATRMNRMGQAEKKWFTDEPDN
AYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatacacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctacttcggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagacttcttcacggtccctccagtgtttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacagttt
tcagaaatcttgcagtttctgaatatacttaaaacaagtaattccatcaagctggtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccatgggaaaatttccaaaataatcaaccgctaacatactgggaatgt
gtttatttgctgatggttacaatgtccaccgttggctatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagtgtgtcg
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcactcag
gtggaattttatcagggttcagtccttaatccccatgacctggcgagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttccataaagaattatcatccgaagataagaattatc
actcagatgttgcagtaccacaataaggcccatctactaaatatcccaagctggaactgg
aaagaaggggatgatgcaatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccgggcctttccacaatgttagccaacctcttctctatgaggtccttcata
aagattgaggaggatacgtggcagaaatactacctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgagctggtg
tttgccaagctgaagctcttgatgatagccatcgagtacaagtcggagaagcgcgagagc
agaagccgaaagcgtatattaatcaatcctggaaaccacgtcaagattcaagaaggtacc
ttaggattcttcattgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaag
gcctgtcatgatgacatcacagatcccaaaaggataaaaaaatgtggctgcaaacggccc
aagatgtccatctacaagagaatgagactggcatgttgttttgattgcggacgctctgag
cgtgactgctcttgcatgtcaggcagtgtacatagtaacatggacacccttgagagagcc
ttcccactttcttctgtctctgttaatgattgctccaccagtttacgtgcctttgaagat
gagcagccgtcgacactatcacccaaaaaaaagcagcgaaatggaggcatgcgaaattca
cccaactcctcacccaaactgatgaggcatgaccccttgttaattcctggcaatgagcag
attgacaatatggatgccaacgtgaaaaaatacgactctacagggatgtttcattggtgt
ccagccaaagacatcgaaaaggtcattttgactcgaagtgaagcagcgatgacagtttta
agtgggcatgtagtcgtttgcatatttggggatgttaaatctgctttgattggattaaga
aatttagtgatgccattacgagccagcaactttcactaccatgaactcaagcacattgtg
tttgtgggttcacttgaatacctgagaagggaatgggagacactgcataacttccccaag
gtttcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtcaacatcaac
ctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctg
caggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagc
attggggtcttgcaggctaattcccaaggctttacacctccagggatggataggacatct
ccagacaatagtccagtccatggccttttacgtcaaccctccattacaacaggagccaat
atccctattataacagagctagctaagcctggcaaacttctgcctttggtttcaatcagt
caggaaaaaaacagtggaacccacattctaatgataactgaactggtaaatgattcaaat
gttcagttcttggaccaagatgatgatgatgatcccgacacagaactgtatctcacgcag
ccttttgcttgtggaaccgcatttgctgtcagcgtgctggactccctcatgagcgcaaca
tacttcaatgacaatatcctcacactgatacggacattggtaacaggaggagccacacca
gagctggaagcactgattgctgaggaaaatgcattgagaggaggttacagcacgccccag
acacttgcaaacagggacaggtgtcgagttgctcagttggctttgtatgatgggccattt
gcagacctaggggacggaggttgttatggagatctcttttgtaaagcactgaaaacatac
aatatgctttgctttggaatttatcgattaagggatgcacatctaagtactcccagccaa
tgcactaaacgttatgttatcacaaacccaccgtatgaattcgagcttgtgccgacggac
ttgatcttctgtttgatgcaatttgaccacaacgctggccagtcccgagccagcctttct
cattcctcccattcctcctactcttccagcaagaagagctcatcagttcactccatccca
tcgacagccaaccgaccgaaccgcaccaagagcagagattcccgggacaaacagaatgca
acaaggatgaatagaatgggccaagcagaaaagaaatggtttacagatgagccggataat
gcctatcccagaaacattcaaatcaagcccatgagcactcacatggccaatcagatcaat
caatacaaatcgacaagcagcttgataccaccaatacgagaagttgaagatgaatgttga
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