Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449740
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Entry
135449740 CDS
T09958
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135449740
03036 Chromosome and associated proteins [BR:
zle03036
]
135449740
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135449740
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
Pre-60S particles
Helicases
135449740
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135449740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135449740
NCBI-ProteinID:
XP_064573113
LinkDB
All DBs
Position
6:complement(33419613..33430322)
Genome browser
AA seq
713 aa
AA seq
DB search
MPEATRCSSSSGAESGSDCSMDTEGVPESGRRRHKKEKKEKKSKRRDKFQRGKTQTDDSE
ESDEERYAPKAKKSKSVSKQNGHTKEESVEKSRLSLSSKSSRRSRQSSSSETSSESDSES
EQDQELTGEQKEGAFSNFAISKETVQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQARTG
TGKTFSFAIPLIEKLQGDSQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVGCFY
GGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQV
EDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVEH
LAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIPQ
KQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGR
TGICICFYQRKEEYQLRHVEQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQTAIEY
FRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDVGFVTMILRCSEEISNMSYA
WRRLREVLGDDIDRKVNRMCFLKGKMGVCFDVPVADQKDIEARWEDSKHWRLCVATELPE
LVESARGGGGGGGSGGGNGRSFSSSRNGRRGGSGRNRFRSRGQKRSFSRAFEH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggccacccggtgcagcagcagcagcggggccgagtcgggctccgactgctcc
atggacaccgagggggtcccggagagcggccgccggcggcacaagaaggagaaaaaggag
aagaaatctaaacgccgggacaagtttcagaggggaaagactcagacagatgacagcgag
gaatcggatgaggagcgttatgccccgaaagccaagaaatcaaagagtgtcagtaaacag
aacggtcacacgaaagaggagagcgtggagaaatcgagattgtccttaagcagcaaatcc
tcccgcaggagccggcagagcagttccagtgaaacgtcaagcgagagcgacagtgagagc
gagcaggatcaggagctgactggagaacagaaggagggtgctttctccaattttgctatt
tccaaagaaactgtccagcttcttcaagctcgaggagtgacgtacctgttccctgtgcaa
gtgaagaccttcaaccccgtgtattctggcaaggatgtcattgctcaggcacggactggg
acagggaaaacattctcctttgccattcccttgattgagaagcttcagggagactcacag
gaaagaagaagaggccgtccaccaaaggttctagttctttgtccaacaagagagctggca
aaccaggttgccaaagatttcaaggatatcacaaggaagctgacagtcggttgtttttat
ggaggaactccctataatggacaaattgacctgatgagaagtggcattgacattttggtg
ggcacccctggtcggatcaaggaccacctgcagaatggcaagctggacctcaccaaggtc
aaacacgttgtgctggatgaggttgaccagatgctggacatggggtttgctgagcaagtg
gaagacattttacgagttgcatacaaaaaggattctgaggacaatccccagacactgctg
ttctctgccacttgcccacactgggtgtatgatgtggccaagaaatacatgaagtccaga
tatgaacagattgaccttattgggaaaagaactcagaaggctgctacaacagtagaacat
ttggcaatagagtgtcactggtctcagagagctgcagttattggagatgtcattcaggtc
tacagtggcagccatggcaggaccattgtcttctgtgagaccaaaaaggaggcaaatgaa
ctggctctgaatgcttcaatcaaacaggattgccagtcgttgcatggtgacattcctcag
aagcagagagagatcacactgaagggttttagaaatggttcatttaaagttctggttgca
accaatgtagctgcccgtggtttagatatcccagaagttgacctggttgtacagagctca
ccaccaaaggatgtggagtcctacatccatcgctcggggcgcacgggccgcgccggccgc
actgggatctgcatctgcttctatcagcgcaaggaggagtaccagctgcgacacgtggag
cagaaagcgggcattacattcaagcgcgttggtgttcctactgcaacagacataataaag
gcttccagcaaagatgccatgaggtgcctggattctgttcctcagactgctattgagtat
ttcagagaatctgctcagttgctgataaaagagaagggaccagttaatgctctggctgca
gccctggcccatatttcgggtgctacttccattgagcagcgctcactgctgaactcggat
gtggggtttgttacaatgatactccgttgctctgaagaaataagcaacatgagctatgcc
tggcgaaggctgcgggaagtgctgggcgatgatattgatcggaaggtgaacaggatgtgt
ttcctcaagggaaaaatgggtgtgtgctttgacgttcctgtggcagaccaaaaagacata
gaggcaaggtgggaagattcaaaacactggcgtttgtgtgtggccaccgaattaccagag
ctggtggagtctgcacgaggaggaggaggaggaggaggcagtggtggagggaatggccga
agcttctccagctccaggaatggtcggcgtggtggctctggtagaaacaggttcaggagc
agaggccagaaacgaagtttcagcagagcctttgaacattaa
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