Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449784
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Entry
135449784 CDS
T09958
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135449784 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135449784 (NUP58)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135449784 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Tox-ODYAM1
NET2A_C
Nup49_C
Mitofilin
PSY3
ASNSD1-SEP
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
135449784
NCBI-ProteinID:
XP_064573182
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All DBs
Position
1:complement(71040420..71076593)
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AA seq
601 aa
AA seq
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MSTGFSFGAGTLGSTAAAGAGGGGAAVGGFSFGTATPSSTGGLNFGTLGSSTATATTSAP
SLGFGSGLFGSKSTTGFTLGSTSTAGTATTIATGLTLGTPATTSAATTGFSLGFSKPAGS
ATPFALPVTSTSAGGLSLSSALTSTPAAGTTGFTLNLGGTTAPTTTASTGLSLGGALAGL
GGSLFQNTSTAATGLGQNALGLSLGTTAAPSTTASEGLGGIDFSSSSDKKSDKTGTRPED
SKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVVA
SGLQRNILNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQ
QYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQYL
GYRKSFLGDAMDVFEARRTEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPAT
GPQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSKPS
GSLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGK
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgggcttctccttcggcgcgggcaccctgggctccacggcggccgccggggca
ggaggaggaggagcagcagtcgggggtttttccttcgggaccgccacgccgagctcaaca
ggaggacttaattttggaactctgggctcttccactgctacggcaactacatcggctcct
tcattgggttttgggagtggactttttggatcaaaatcaaccactggctttacactagga
agcaccagtacagcaggaacagcaacaactattgctacaggactgacattaggcacacct
gccaccacatcagcagctaccacaggctttagtttaggtttcagcaaacctgcaggttca
gccacgccatttgctttacctgttacttctacctcagcgggtggcctgtcattatcatct
gctctcacatcaactcctgcagcaggaactactggctttacattaaatttgggtggcaca
actgctccaactacaactgcttccacaggcctttccttgggaggagccttagcaggctta
ggaggttcactcttccagaatacaagcacagcagcaacaggacttgggcagaatgctttg
ggtttatctctggggacaactgcagctccttcaactactgccagtgaagggcttggcggc
attgattttagcagttcttcagacaaaaagagtgacaaaacaggaacaagaccagaagat
agcaaagcgctgaaggatgaaaatctacctccagttatatgtcaagatgtagaaaattta
cagaaatttgtgaaagaacaaaaacaagttcaggaagaaattagtagaatgtcctctaaa
gcgatgcttaaagttcaagaagacattaaagctttgaaacagcttctctctgtagttgcc
agtgggttacagagaaacattcttaatattgacaagctgaaagttgaaactgcacaggag
ctaaagaatgcggaaatagcattgcgaacacagaaaactcctccgggtcttcagcatgaa
aatacagccccagcagactacttcagaatcttggtcgaacagtttgaagtacagctgcag
cagtacaggcaacaaattgaagaactggaaaatcatcttgctactcaagcaaataattca
cacataactccacaagatttgtctatggctatgcagaaaatctatcaaacatttgtagct
ttagctgcacaacttcagtcaatacatgaaaatgtaaagatgctcaaagaccaatacctt
ggctacaggaaaagctttctgggagatgccatggatgtgtttgaggcaagacgaacagaa
gcaaagaagtggcaaagcgcgccacgcgttaccactggaccgacccctttcagcaacata
ccaaatgcagcagccgttgcaatggctgcaacacttactcagcagcaacagcctgctaca
gggccacagccatctctgggagttagttttggaacgccattcggctcaggtattggcact
ggcttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagctctgcc
tttggaagtagtgccacaggagcatcatcatttgggtttggaactacaagtaaaccatca
ggaagtctaagtgcaggctttgggagctcgactacatctgggtttaacttcagcaatcct
ggcatcacagcatcagctggcctgacgttcggggtgtctaatcctgcatctgcaggcttt
gggacaggagggcaacttcttcagctgaagaaacctccagcaggaaacaagcgagggaaa
agatag
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