Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449951
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Entry
135449951 CDS
T09958
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135449951 (RRP12)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
90S particles
Other 90S particles
135449951 (RRP12)
Pre-60S particles
Other pre-60S particles
135449951 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
TOR1L1_N
DUF6461
Motif
Other DBs
NCBI-GeneID:
135449951
NCBI-ProteinID:
XP_064573546
LinkDB
All DBs
Position
6:complement(13920642..13932507)
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AA seq
1316 aa
AA seq
DB search
MAAGAGSGNEAVGTAARGAGSSMARSGRLRSGAAAKLKRWRKGHSSDSNPETRQHRLAAR
SRFCSRPAEKSNLTVDAVKLHNELQSGSLRLQRAGDSAQQMEEGSAEEAATERSSGTFLS
GLSDCSNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSRGGKESETEYFAALMTTLEA
VESPESLSAVAYLLNLVLKRVPSPVLIKKFSDASKAFMSVVSSQACSSSTSALRWVLSCL
ATLLRKQDLAAWSYPVTLQVYHGLLSFCVHTKPKVRKAAQHGVCSVLRGSEFMFGDAAPE
HHPAAPSTAKFCVQEIEKAGGAKEATTTLHVLALLRDLLPCFPAAVVKTCCETLLRVMTL
SHVLVTACAMQAFHSLFSAQASVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTMER
AHINLGRLQKDLCWAHLPRLFSAAMNCFLSPHSQVVSAAAQTLETILSECIAPHMEDVGT
VSASAPAPAAYLCKMFRSVEEGLTYRFHAAWDEVLRVLEVFFETCGKQCHPIMRKCLQSL
CDLRLSPHFPYTAEVDQAVGAAVSTMGPEVLLEAVPLEINGKEETLDFPRSWLLPVLRDN
VQGARLGFFTSYFLPLAATLKSRALEFTQAGKSVEAKIYDTLQWQVWTLLPGFCTHPTDV
LGAFKGLARTLGMAISERSDLRPTVCQALRTLIHKGCETDAERTEVGRFAKNFLPILFNV
YSQPEEDGGTSAQRRSVLDTVRAYLTITDPQMVCGFLEKASAKLTSPESSEFARLSILDL
VVAMAPYADEQSLDSLYRTIQPSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVHSHLQE
LQAALLDSLKSAASPAKRPRLKCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGARKN
AFMLLVEMGHAFIRFGPTPEEAMQRFLLLIYVGLTGSVTMISCTVLALTRLFFEFKDHLE
FSVVEQLLQNICLLLASRTRDVVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSDDM
RRHFRMKLRNLFIKFIRKFGFELVKGLLPAEYHKVLVNIRKAESRSRKQRALKKAAADAD
EEEAPAPQPRGDSMEEILADSEDEEEEEEERHRGKEWRKQARQKGQAWLKEGEDDEPLNF
LDPNVSQRVLATKPGPKRSRGVSHDFQMSEDGRLIIHEEEEELDDDEGKGADEEMADVLQ
DVGLRSKKSQKRRFREEPDDEEAEGGTSSQYRAGGSGIHRPLNKVPAFGAEYRSKKGKGD
VKKKGQLDPYAYIPLNRAKLNRRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKAQRS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggcgccggaagcggaaacgaggctgtgggcacggccgcacgtggcgccggg
tccagcatggcgcggagcgggaggctccgctcgggagccgcggccaagctgaagcgctgg
cggaagggacacagcagcgactccaaccccgagacccgccagcatcgtctggctgcccgc
agccgcttctgcagccggccggcggagaaaagtaacctgacggtggatgcagtgaagctg
cacaatgagctgcagtcggggtccctgcgtctgcagcgggcgggtgacagcgcccagcag
atggaggagggcagtgctgaggaggcggccacagagagatcctccggcaccttcctgagt
ggcctgagcgactgcagcaatgtcaccttcagcaaggtgcagcgcttctgggaatccaac
tctgctgctcacaaagagatctgtgccgtgctggcggctgtgacagaggtgatccgctcc
cggggcggcaaggagagcgagacagaatactttgctgcactgatgaccacgctggaggca
gtggagtcccccgagtcgctgtctgctgtcgcctacctgcttaaccttgtcctaaagcgg
gtcccaagccctgttctcattaagaagttctcagatgcctcaaaagccttcatgagtgtc
gtgtcctcacaggcctgcagcagctccacctctgccctgcgatgggtgctctcttgcctg
gccacactgctacggaagcaagacttggcagcctggagctaccctgtcaccctgcaggtc
tatcacggcttgttgagcttttgtgttcataccaagcccaaggtgcggaaggcagcgcag
cacggcgtgtgctctgtcctgaggggcagtgagttcatgtttggcgatgcagcccctgag
catcaccctgcagcaccctccaccgccaagttctgtgtgcaggagattgaaaaagctgga
ggtgccaaggaggccaccaccaccctgcatgtccttgccctgctgcgggacttgctgccc
tgcttccctgcagctgtggtgaagacctgctgtgagaccttgctcagagtcatgaccctc
agccatgtgctggtgacagcgtgtgccatgcaagctttccacagcctcttcagcgcccag
gccagtgtggcctgcctgccagctgagctcaatgcccagatcatcaccgctctctacgac
tatgtgcccagcacgagtgacctgcagccactgctgacctggctgtccaccatggagcgg
gctcacatcaacctgggcaggctgcaaaaggacctgtgctgggctcacttgccccggctc
ttctctgctgccatgaactgcttcctctccccacactcccaggtggtgtcagcagcagca
cagaccctggagactatcctgagtgagtgtattgctccccacatggaggatgtgggaact
gtgtctgcatctgccccagcccctgctgcctacctgtgcaagatgttcagatcagtggag
gaagggctgacataccgtttccatgcagcgtgggatgaagttctgcgagtgttggaggtc
ttctttgagacatgtgggaagcagtgccatcccatcatgaggaagtgtctccagtccctg
tgtgacctgcgtctctccccacactttccctacactgctgaagtggaccaggcagtgggg
gctgctgtgagcaccatgggtcccgaggtgctcctggaggctgtgcccctggagatcaat
ggcaaggaggagacgctggatttcccccgcagctggctcctgccggtgctgcgggacaac
gtgcagggtgcacgccttggcttcttcaccagctacttcttgcctttggcggccaccctg
aaaagcagagccctggagtttacccaagctgggaagagtgtggaggccaagatctacgac
acgctgcagtggcaggtctggactctgcttcctggcttctgcacgcatcccacagatgtg
ctgggggccttcaaggggctggcccgcaccctgggcatggccatcagcgagcgctccgat
ctccgccccaccgtgtgccaggccttgcgcaccctcatccacaaaggctgcgagacagat
gcggagcggacagaagtgggtcgctttgccaaaaatttcctgcccatcctgttcaatgtg
tacagccaacccgaggaggatgggggcacaagtgctcagcgccgctctgtgctggacact
gtccgtgcttacctgaccatcacagatcctcagatggtgtgtggattcctggagaaagcc
agtgcaaagctgaccagtcctgagagctctgagtttgccagactctccatcctggacctg
gtagtggcaatggcaccctatgctgatgagcagtccctggactccttgtaccgtaccatc
cagccttccctccagagcaaagagcgcagcatgcagaagaaggcgtaccgtgtgctggag
gaggtgtgtgctgctccccacgctccctgccaggcctttgtccactcccacctccaggag
ctgcaggcagcgctgctggactcgctcaagagcgcagcatccccggccaagaggccacgg
ctgaaatgcctgttccacattgtgaagcagctgtctgcagagcacgagccttttgtcact
gccctggtcccagaggtcatcctgtgcaccaaggaggtgtctgtgggggcccgcaagaac
gccttcatgctgctcgtggagatgggccatgctttcatccgctttgggcccacccctgaa
gaggccatgcagcgcttcctgctcctcatctacgtggggctcactggctcagtcaccatg
attagctgcaccgtgctggcgctgacccgcctgttcttcgagttcaaagatcacctggag
ttcagtgtggtggagcagctcctgcagaacatctgcctgttgctggcctcccgcacacgg
gatgtggtcaaggcagccctgggattcctgaaggtcacactgctcctggtggacaccaag
ctcctggccaagcatgtccagacaatgctggaggctgtggggaacctttcagatgacatg
aggcgccacttccgtatgaagctgcgaaaccttttcatcaagttcatccgcaagtttggc
tttgagctggtcaaggggctgctgccagccgagtaccataaggtgctggtgaacatccgc
aaggcagagtcccggagccgcaagcagcgtgccctgaagaaggcagctgcagatgcggat
gaggaggaggcaccagcaccacagcccagaggagacagtatggaggagatcctggctgac
tcagaggatgaggaggaggaagaggaggaacggcatcggggcaaggagtggaggaagcaa
gcacggcagaagggccaggcatggctcaaggaaggggaagatgatgagcccctcaacttc
ctggaccctaatgtgtcccagcgggtgctggccaccaagccaggccccaagcggtccaga
ggagtgagccatgatttccagatgtctgaggatggacgcctaatcatccatgaagaggaa
gaggagctggatgatgatgaaggcaaaggagcagatgaggagatggcagatgtgctgcaa
gatgtggggctccgcagtaagaaaagtcagaagcgtcggttcagagaggagccagacgac
gaggaagctgagggtggaacctcttctcagtatagagctggaggctctgggatccatcgg
ccgctgaacaaggtgccagccttcggtgcagagtatagatccaagaaaggtaaaggtgac
gtgaagaagaagggccaactcgacccctatgcctacatccccctgaacagagctaaactc
aacagaaggaagcgggcgaaaatgcagggccagttcaagggcctgatgaagggcgcgcag
cgcggggccaaggccggccgcaggaaccgtctgaaggcccaacgctcctga
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