Zonotrichia leucophrys gambelii (white-crowned sparrow): 135449968
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Entry
135449968 CDS
T09958
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135449968 (SORCS1)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Others
Others
135449968 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
135449968
NCBI-ProteinID:
XP_064573576
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All DBs
Position
6:10532286..10788851
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AA seq
1312 aa
AA seq
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MEKVAGWYPAWHVALLYWTWLFLFTYGFTGAEITCRSCRSQVQPQQQPQQGLLMHLRTDR
GEKEQRSFLGEKGGERGQEAGTEDAGLQATLAPAPAGMQFSGWETRRVPRDPEKVAGERR
PRAAAAASAEDRALQGPPRPGGPGPGSVRRRWGRSPRGSVGPGPGGAAGREPGDGGAARF
GLEELRLASTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDY
GTTYEKLNDKVGLKTILSYLYVCPTNKRKVTLEKVKVGVCAQPSPQAVTQQLSKTLRCCS
VFSFNGEKEVAESIRVWSKIMLLTDPEVESSLLISSDEGATYQKYRLNFYIHSLLFHPKQ
EDWILAYSQDQKLFSSVEFGRRWLLLHEGVTPNRFYWSMMGNGREPDLVHLEARTVDGYA
QYITCKMQNCSEATRSKPFPGYIDHNSLIVQGDYVFVQLTSGGRPHYYVSYRRSPFAQMK
LPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSQGLEG
NVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWSLLQAPHTDLRGNPIHCLLPYC
SLHLHLKVSDNPYTSGNIASRDTAPSIIVASGNIGTELSDNDISMFVTSDAGNTWRQIFE
EEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSLPLFVDGVLGEPGEET
LIMTVFGHFSHRSEWQLVKVDYKSIFDRRCEEEDYRPWQLHSQGEACIMGAKRIYRKRKS
EKKCMQGKYAGAMTSEPCVCTEADFDCDYGYERHSNGQCLPAFWYNPSSLSKDCSLGQSY
LNSTGYRKVVSNNCTDGVRERYTAKPQQCPGKPPQGLRILTADGRLTAQQGHNVTFLVQL
EEGDLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGIFRVTVLVENSLGSDSAVLY
LHVTCPLEHVHLSLPFVTTKNKEINATAVLWPSQVGTLTYVWWFGNNTEPLITLEGSITF
TFSVEGMNTITVQVSAGNTILQDTKTIAVYEKFQSLRLSFSPNLDDYNPDIPEWRRDISR
VVKRALVEATGISSKHVLVAVLPGLPTSAELFILPYQDATGEKKRTAANLEQISETLIQK
LNQNLVHFELKPGVRILVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLAVFIIYKFK
RKIPGLNIYAQMQNEKDQEMVSPVSQRENIPNVPQRELMSPEQLVDEKLEVHPIEQPQAT
VQSPRKGNATKVVWTEDFQKACGSPRDFKPRPRAEVFPQLLSPRAQKKSLPM
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacgttgctctcctgtactggacatgg
cttttcctcttcacttatggctttaccggcgcagaaataacttgcagatcctgccgttcc
caggtgcagccgcagcagcagccgcagcagggattactgatgcacttgaggaccgacaga
ggagaaaaggagcaaaggagcttcctcggggagaagggaggtgagagagggcaagaggcc
ggcacggaggatgccgggctgcaggcgaccctcgcccctgctcccgcggggatgcaattc
agcggctgggagacacggcgagtgccgagggacccagagaaagtggccggggagcgccgt
ccccgagcggcagcggcggcttcggccgaggaccgagcgctccagggcccccccaggccg
ggcggccccgggccgggctcggtgcggcggcgctggggccgcagcccgcggggctcggtg
gggccggggccgggcggcgccgcggggcgggagccgggggacggcggcgccgcccgcttc
gggctggaggagctgcggctggccagcaccaccttcgccctggccggagactcggcgcac
aaccaggccatggtgcactggtccggccacaacagcagcgtgatactaattctgacaaag
ctgtatgactacaacctgggaagcatcacagagagctctctttggaggtcaacagattat
gggacaacatatgagaaactgaatgataaagttggtctgaagactattttgagctacttg
tatgtttgcccaacaaacaaacgtaaggttactcttgagaaggtgaaggtcggtgtttgt
gcacagcccagcccacaagcagtgactcagcagctctcaaaaaccctgagatgctgcagc
gtcttcagctttaatggagaaaaagaagtagctgaatctattcgtgtctggtccaagatt
atgctgctgactgatccagaagttgaaagcagcttattaatcagttctgatgaaggagcc
acctatcaaaaataccgtctgaacttctacatccacagtctgctcttccatcccaaacag
gaggattggatcttagcctacagccaggatcagaagttattcagttctgtggagtttggc
agaagatggctgcttcttcatgagggagttacacccaacaggttctactggtctatgatg
gggaatggaagagagcctgacctcgtgcacctggaggccaggacagtggatggctatgcc
caatacatcacttgcaagatgcagaactgcagtgaagccactcgcagcaaaccctttcca
ggctacattgaccataactccctgatcgtccagggtgattatgtctttgttcagctgaca
tcaggaggaagaccacattattacgtttcttataggaggagcccatttgcacagatgaag
ctgccaaagtactccctgcccaaggacatgcatgttatcagcacagatgagaatcaggtg
tttgcagctgttcaagagtggaaccagaacgacacgtacaatctgtacatctccgacacc
cgaggggtctacttcaccctggccttggaaaatgtcaagagtagtcaagggctggagggg
aatgtgatgattgacctctatgaggtagcagggataaagggaatgttcttggctaacaag
aagattgacaaccaagtgaaaactttcatcacctacaataaaggcagagactggagtttg
ttgcaggctccgcacacggatctgaggggaaatcccattcactgtctcctaccctattgc
tcccttcatcttcacctgaaggtctcagacaacccctatacctcaggaaacatcgccagc
cgagacactgcccccagtattattgtagcttcaggtaatataggcactgagctatcagac
aatgacatcagcatgtttgttacttctgatgctgggaacacttggaggcagatctttgag
gaagagcacagtgttctgtacctggatcaaggtggagtacttgttgccatgaaacataca
tctctgcctatcagacacctctggttaagttttgatgaagggagatcttggagcaagtac
agtttcacatccctcccactgtttgtagatggagttttaggggagcctggagaggaaacc
ctcatcatgacggtgtttggacacttcagccaccgctctgagtggcagctggtgaaagtt
gactacaaatccatctttgatcggagatgtgaggaagaggactacaggccttggcaactc
catagccagggagaagcctgcatcatgggagcaaaaaggatctacaggaagcgcaagtca
gagaagaaatgcatgcaagggaaatatgctggggccatgacctcggagccctgcgtgtgc
acagaggcagactttgactgtgattatggatatgaacgccacagcaatgggcagtgttta
cctgcattttggtataacccatcctccctgtctaaagactgcagccttggacagagttac
ctcaacagcactgggtacaggaaggttgtttccaacaactgcacggacggggtgcgcgag
cgctacacggccaagccccagcagtgcccgggcaaacctccgcaggggctgcgcatcctc
acggccgacgggcgcctcacagcccagcagggccacaatgtcaccttcctggtgcagctg
gaggagggagacctccagagatccctcatccaggtggattttggagatggcatcgctgtg
tcatatgccaacctcagctctacagaggatgggatcaagcacatctaccagaacgtgggc
atattccgggtgacggtgctggtggaaaacagcctgggctctgacagcgctgttctctac
ctgcatgtaacatgccccttggaacatgttcacttatctctgccctttgtcaccacgaag
aacaaggagatcaatgccacagcagtgctgtggccaagccaagtgggaacactcacttat
gtctggtggtttgggaacaacacagagccactgatcacattggaagggagcatcacattc
acattttctgtggaagggatgaataccatcactgttcaggtctcagcaggaaacaccatt
cttcaggacacaaagactattgcagtgtatgagaaatttcagtccctgaggttatcattc
tctccaaaccttgatgactacaacccagatatcccagagtggagaagggacatcagcaga
gtagtcaagagagctctggtggaggctacaggtatttccagcaagcacgttctggttgca
gtgctccctggcctgcccacgtctgctgaactcttcattttaccatatcaggatgccaca
ggagaaaaaaaaagaacagcagcaaacctagagcagatttcagaaacactgatccagaaa
ctgaaccaaaacctggtccattttgagctgaagccaggagttcgaatccttgtccatgct
gcccatttaacagcagctcccctggtggacctcactcccagtcacagtggctcagccatg
ctgatgctcctctctgttgtttttgtgggactagctgtgttcatcatctacaagttcaaa
aggaagattcctggccttaatatatatgcacagatgcagaatgaaaaagatcaagagatg
gtcagtccagtcagtcagagggaaaacatacctaatgtccctcaaagggagctgatgagc
cctgagcaactagtagatgagaagttggaagtccaccccatagagcaacctcaggccaca
gtccagagcccaaggaaaggaaatgcaaccaaggtagtctggacagaggacttccaaaaa
gcctgtggatcaccaagagatttcaagccaagacccagagcggaagtatttccacaactg
ctgagtcccagagcacaaaagaaatccctacctatgtaa
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