Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450026
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Entry
135450026 CDS
T09958
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135450026 (SCN2A)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135450026 (SCN2A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
135450026
NCBI-ProteinID:
XP_064573699
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All DBs
Position
7:complement(27335561..27409134)
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AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAQKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSI
GENGTFINATMTIFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTIVDIGKNLAY
LKDGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVE
EGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEEMENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRQKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacccgacagcttccgctacttcacaagagaa
tcccttgcagctattgaacagcgtatcaatgaagagaaagctcaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccgaagccaaacagtgacttggaggcaggaaag
acactgccatttatttacggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattacatcaataaaaagacctttatagtattaaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacgtttctccgtgacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaagaccattgtaggagcc
ctgattcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagt
gtatttgcgctgatagggctgcagctgttcatgggcaacctaaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttccatctttaatagctctata
ggtgaaaatggaacatttattaatgcaacaatgacaatatttaactgggatgaatacatc
gaagacaaaagtcatttctacttcttggaaggacaaaatgatgcactgctctgtggcaat
agctcagatgcaggtcaatgcccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttttggtcattttcctgggttctttctacctaatcaacttgatc
ttggctgtggttgccatggcctatgaagaacagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaacttaaaaagcaacaggaagaagct
caggcggcggcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaagctgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcagaaagaacagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatcggaatcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaagggaatagattgacatatgaaaagagattctcttccccacatcagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaacgagagcagaagagattctctctttgttcctcatagacacggagaa
cgacgcaacagcaacatcagccaggccagtaggtcatccagaacagtccctgcacttcca
gcaaacgggaagatgcacagcactgtggactgcaatggagtggtgtcgttagttgggggg
ccgccagctttgacatcgcctacgggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacggaaactgacttaagaaagagacattctagttct
taccacgttcctatggactacctaacagaccctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaacacaatggaagaactggaagaatccagacagaaatgtccacca
tgctggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctaaaa
gtcaaacatattgtaaatttgattgtgatggacccatttgttgatctggccattaccatc
tgcatcgtcctgaacaccctgttcatggccatggagcactacccaatgacagaacagttt
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagagggctggaatatatttgat
ggttttattgtgagtcttagtttaatggaacttggccttgcaaatgtagaaggattatct
gtccttcgatcgttccgattgcttcgagttttcaaattggcaaaatcttggcctactcta
aatatgctgattaagattattggcaactcagtgggggctctgggaaacctgaccctggtg
ctggccatcattgtgttcattttcgctgtggttgggatgcagctctttgggaagagctac
aaggaatgcgtctgcaagatctccagtgactgtgaactgcctcgctggcacatgcacgac
tttttccactctttcctgattgtattccgagtgctgtgtggggaatggattgaaaccatg
tgggactgcatggaggttgcaggccaaactatgtgccttacagtcttcatgatggtcatg
gtgattggaaacctagtggtactcaacctatttctggccttgctgctgagctcatttagt
tcagacaaccttgctgctacagatgatgataatgaaatgaacaatctccagattgctgtg
gcaaggattcagaaaggcatagattatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaaacagaaagctttagatgaaatcaaacctcttgaagacctaaacaat
aaaaaagacagctgtatttccaaccatacaatagtagacataggtaaaaaccttgcctat
ctcaaggacgggaatggaacgaccagtggcataggcagcagtgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtctcaccgtgacagtgcccatt
gctgttggagaatcagattttgaaaatttaaacacagaggagttcagcagtgaatcagac
ctggaagaaagcaaagagaaattgaatgcatccagttcatcagaaggcagcacagttgac
attggactacctccagaaggtgaacagccagaagcagaaccagaagaagttctagagcca
gaagcttgttttacagaagggtgtgtacggagattcaaatgctgtcaagtcagtgtagaa
gaaggaaaggggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcatagtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatctacatagagcaacgtaaaactatcaagaccatgctggaatacgctgacaaa
gttttcacctatatcttcattctggaaatgcttttaaaatgggttgcttatggctttcaa
acctatttcactaatgcatggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctgagagccttgtcgcgatttgaagggatgagggttgtggtg
aatgccctgttaggagcaattccatctattatgaatgtgcttcttgtttgccttatattc
tggctgatatttagtatcatgggagtaaatctgtttgctggaaagttttactactgtgtt
aacactacaactgatgagagattcgatatcagccaaattaacaacttcagtcagtgtgag
gagctcatacaaaacaacgaaactgcccgctggaagaatgtgaaggtcaactttgacaat
gtaggccttggttacctatctctgctccaagtggctacatttaaaggatggatggatatc
atgtacgcagctgtggattctcgtaatgttttggatcagcccaagtatgaagataacctg
tacatgtatctttactttgtcatctttatcatctttggatcgttttttaccttgaacctt
tttattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagat
attttcatgacggaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagcctatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaaccaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggttacc
atgatggtagaaacagatgatcaaagtgaagaaatggaaaacattttatattggattaac
ctggtgtttatcgtacttttcactggagaatttgtcctgaaattgatttcacttcgtcat
tactacttcactataggttggaatatttttgattttgtggttgtaattctctccatagta
ggtatgtttttggctgagatgattgagaagtactttgtatctcccacactattcagagtc
atccggcttgccaggatcggtcgaatcctgcgcctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctctccctgctttgttcaacattgggctgctgctc
ttcctggtcatgttcatctatgccatatttggcatgtccaactttgcctacgtcaagagg
gaagttgggattgatgacatgttcaactttgaaacgtttggcaacagcatgatctgcctg
ttccagatcaccacgtccgctggctgggacggtttgctcgccccaattctcaacagtggg
gagccggactgtgacccccataaagatcatccagggagctctgtgaaaggtgactgtggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcttttctggtagtg
gtgaacatgtacattgctgtgattttggagaacttcagtgttgctactgaagaaagcgct
gaacccttgagcgaggatgactttgagatgttctatgaagtctgggagaagtttgacccc
gatgcaacacaattcatagagttcagtaaattatcagattttgctgcttcattagatcca
cctcttctcatagcaaaacccaacaaagtccagcttattgcaatggatctgcccatggtg
agcggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaat
ccttctaaagtctcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtg
tctgctgtcatcattcagcgtgcttacagacgtcatctcctgaggcaaaaagtcaaaaaa
gtatcatgtatatttagtcaggataaaggtaaagaggaagatgatctgcccatgaaagaa
gatatgattatggataaactaaatgagaactccactccagaaaaaacagatatgacccca
tccacaacatccccaccttcttatgacagtgtaacaaagccagacaaggataaatatgaa
aaagacaagtcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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integrated database retrieval system
