Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450111
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Entry
135450111 CDS
T09958
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135450111 (ZC3H12C)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
135450111 (ZC3H12C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
135450111
NCBI-ProteinID:
XP_064573986
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Position
1:complement(73553369..73597469)
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AA seq
858 aa
AA seq
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MGLKDHLGHDLGHLYVGSTGTQINAIVPWSMAEKPTMDKVNSRKEDREKETSEETSGSSS
CDSEESTNSDNDSERLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILQDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVTNANTSVMHEASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKSEGTSELKRAAPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNSLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDVGYYSMLSAYSNLSISGPRSPERRFSLDTDYRISSVASDC
SSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHAHGRLNAQPFLQSYHEPLAR
VQSYSHEEPKHHHKSPIPYMAVHLQHAAVGARSSCPNEYSAPQSSPHSKALHLGRALVST
RIDSISDSRLYENSPLRHRKPYSGQEGLGGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQEQPWRVPYCGIPPQDPPRLQDTREKVYINLCNIFPPDLVRMVMKKNPHVT
DAQQLAAAILVEKSQLGY
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggagcactggc
acacaaataaatgcaattgtaccttggtcgatggcggagaagccaacaatggataaggtt
aattctaggaaagaagacagagaaaaggagacatctgaagagacttctggaagctccagc
tgtgactccgaagaaagcacaaattctgataatgattcagagagactgaataattctgca
tcggagtcacatttattgcctaagactcatcgacagctgtgccgatctccttgcttagag
cctcatatactaaaaagaaatgagatcttgcaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagcctcctgatgtggtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactccgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaactgag
actgatcagactgtaactaatgctaacactagtgtaatgcatgaagcgtcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacagaggatggagacaacctgagg
ccaatagttattgatggcagcaatgttgcaatgagccatgggaacaaagaagtattttct
tgtcgaggaatcaaattggcagtagattggtttttggaaagaggccacaaggatgttact
gtgtttgtgccagcgtggaggaaagagcagtcaagacccgatgctcttataacagatcaa
gaaatcttacgtaagttggagaaggagaagattctcgtgttcactccgtcgcggcgcgtg
caggggagaagggtggtgtgctacgatgaccgattcatagtcaagttggccttcgagtca
gatggcatcattgtctccaatgataactacagggatctagctaatgaaaagccagaatgg
aagaagttcatagatgaacgcttgttgatgtattcttttgttaatgacaaatttatgcct
cctgacgatcctcttggccgccatggtccaagtctggacaattttcttaggaagaagcct
attgtgccagagcataagaagcaaccatgtccatatgggaagaaatgtacctatggacac
aaatgcaaatactatcatccagaaagaggaaatcagcctcagcgatccgtagctgatgaa
ctccgtgccatgtctagaagcacagctgccaaaactacgagtgaaggaggactggtaaaa
agcaatagcgttccctgtagcactaaaagcgagggcacttcagagctgaagcgggctgct
ccaaagaggcaatcggatcctagtataaggactcaagtgtatcaggacttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagcataccaagt
tcctctgctggaaaaccccaaagtactgcacctttaactaacagccttccatccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcatggaacaccaatgccttatgaccagtatccaaaatgtgagtctccggtggac
gtagggtattactctatgctgagtgcatattcaaatctcagcatatcgggaccgcgtagt
cccgagaggcgcttctccctagacacagattatcggattagctccgtagcttccgactgc
agcagcgaggggagcgtcagctgtggcagcagcgattcctacgtgggttacagcgaccgc
tcctacatgagttctcctgacccacagctggaggagaacttgaagtgccagcacatgcac
gcccacggccgccttaatgctcagcccttcctgcagagctaccacgagcccctggctcga
gtgcagagctacagtcacgaagaaccaaagcaccaccacaaatctcccatcccgtacatg
gctgtgcatctgcagcacgcagcagtcggtgctcgctccagctgtcccaacgagtactcc
gcgcctcagagctcgcctcattcgaaggcgctgcacctggggagagccctggtgtccacg
aggatagacagcatctcagactcgcgcctgtacgaaaactcccccttaagacacaggaag
ccttactctggccaggaagggctgggaggctgggataggcagagttacggcatggatgcc
tacggctaccgccagacgtactccttgcccagcaaccccacacagccgtgctacgagcag
ttcgccttccaaagccttcccgagcagcaggagcagccctggcgcgtcccttactgtgga
atccccccgcaagaccccccaaggctccaagacacccgggagaaggtttacattaacctc
tgcaacatcttcccccccgatctcgtgcgcatggtgatgaagaagaaccctcacgtgacg
gacgctcagcagctcgctgctgccatcttagtggagaaatctcagctaggttattga
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