Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450142
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Entry
135450142 CDS
T09958
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135450142 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135450142 (HSPD1)
03110 Chaperones and folding catalysts [BR:
zle03110
]
135450142 (HSPD1)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135450142 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135450142 (HSPD1)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
135450142 (HSPD1)
Messenger RNA biogenesis [BR:
zle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
135450142 (HSPD1)
Chaperones and folding catalysts [BR:
zle03110
]
Heat shock proteins
HSP60 / Chaperonin
135450142 (HSPD1)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
135450142 (HSPD1)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135450142 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
135450142 (HSPD1)
Exosomal proteins of breast cancer cells
135450142 (HSPD1)
Exosomal proteins of colorectal cancer cells
135450142 (HSPD1)
Exosomal proteins of bladder cancer cells
135450142 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
135450142
NCBI-ProteinID:
XP_064574058
LinkDB
All DBs
Position
7:complement(17769637..17779811)
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AA seq
573 aa
AA seq
DB search
MLRLPTVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDKISKGANPVEIRRGVMLAVDAITAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANANRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKGQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALTPANEDQKIGIEIIKRTLRIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEVPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttacctacagtactccgtcagataagaccagtgtccagagccctcgccccc
catctaacacgagcctatgcaaaagatgtgaagttcggagcagacgcaagagctctgatg
ctacaaggagtagatcttttagcagatgctgtagctgtcaccatggggccaaagggaaga
acagttattattgaacaaagctggggaagtcccaaagtgacaaaagatggtgtgacagta
gcaaaggcaattgacttgaaagacaaatacaaaaacatcggcgccaagttagtccaagac
gttgccaacaataccaacgaggaggcaggagatggaaccactactgcaacagtcctggca
cgagccattgccaaggagggctttgacaagatcagcaaaggagccaaccctgtagaaatc
aggaggggggtgatgctggcagtggatgccatcacagctgaactgaagaagctgtcaaaa
cctgttacaactccagaagaaattgcacaggttgccacaatatcagcaaatggagatcag
gaaattggcaatataatctctgatgcaatgaaaaaggttggacgaaagggtgtgatcact
gtcaaggatggaaagactctaaatgatgaactggaaatcattgagggtatgaaattcgac
agaggctacatctctccatattttattaacacaactaaagggcagaaatgtgaattccag
gacgcttatgttttaatcagtgaaaagaaaatctctagtgtacagtccatagttcctgct
cttgaaattgccaatgccaaccgcaaacctttggtcatcattgctgaagatgttgatgga
gaagccctcagcactctagtcttgaacagactgaaggttggccttcaggttgttgctgta
aaagcaccaggttttggtgataacaggaaaaaccaacttaaggacatggcgattgctact
ggtggtgctgtgtttggagaagagggtttgaacctaaatgtggaagatattcagcctcat
gactttggtaaagttggagaggtcattgtgacaaaagatgacaccatgctcctcaagggg
aagggtgaaaagggtcagattgaaaaacgcattcaagaaataattgaacagctagaggtt
accaccagtgaatatgaaaaagagaaactgaacgagcgactggccaagctgtctgatgga
gtagcagtattgaaggtgggcggaaccagcgatgttgaggtgaacgagaagaaggacagg
gtcaccgacgccctgaacgccacccgtgcggctgtggaggagggcatcgtgccagggggt
ggctgtgccctgctgcgctgcatcccagccttagatgccttaactccagccaacgaggat
cagaaaattggcattgaaataatcaagagaacactgagaatcccagcaatgactatcgca
aagaatgccggtgttgaaggatcattgatagttgaaaaaatcctgcagagcccatcagaa
gttggctacgatgcaatgcttggggactttgtaaatatggtagaaaaaggaatcatagac
ccaactaaggttgtgagaactgctctgatggatgccgcgggtgttgcatctctcctatca
acagcagaggcagtggtgactgaagttcctaaagaagaaaaggagccggcaatgggagga
atgggtgggatgggtggaggaatgggaggtggcatgttctaa
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