Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450156
Help
Entry
135450156 CDS
T09958
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04382
Cornified envelope formation
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
zle04514
Cell adhesion molecules
zle04810
Regulation of actin cytoskeleton
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135450156 (ITGA6)
04514 Cell adhesion molecules
135450156 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135450156 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135450156 (ITGA6)
04810 Regulation of actin cytoskeleton
135450156 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135450156 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135450156 (ITGA6)
04515 Cell adhesion molecules [BR:
zle04515
]
135450156 (ITGA6)
04090 CD molecules [BR:
zle04090
]
135450156 (ITGA6)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135450156 (ITGA6)
Exosomal proteins of breast milk
135450156 (ITGA6)
Cell adhesion molecules [BR:
zle04515
]
Integrins
Integrin alpha subunits
135450156 (ITGA6)
CD molecules [BR:
zle04090
]
Proteins
135450156 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF4381
Motif
Other DBs
NCBI-GeneID:
135450156
NCBI-ProteinID:
XP_064574085
LinkDB
All DBs
Position
7:complement(25282308..25319462)
Genome browser
AA seq
1139 aa
AA seq
DB search
MALAAGSRAGRERMAALLVLYLPLLPGLAGAFNLDTDNVISWSGETGSLFGFSLAMHRQL
QPQEKRLLLVGAPREKAFPAQQANRTGGLYSCDIASPNTNCLRVKFDEETDPRTESKEDQ
WMGVTVQSQGPGGNVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWS
FCDGRLRGHEKFGSCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFD
DGPYEVGDESRQDKNLVPVPANSYLGLLFLTAVSDTHPDQFVYKTLPPSIQVDKSVDVMM
NSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALSLEHMFEGEGLAS
SFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYIYMNRQGNWAGVKPLRLNGTTD
SMFGLAVENVGDINQDGYPDIAVGAPYDGFGKVYIYHGSKNGINTKPAQILDGEKTNTNF
FGYSIAGNMDLDKNSYPDVAVGSLSDSVNVYRSRPVISIRRNITVQPDRIDLKKKNPEDH
GEIRMDVKACFQYTANPRDLNPRIKINYTFEVENERRQLGLPSRVRFSDHSSDQFTASTT
LRGQNSWECVTAKLILQEKIKDKLRPIPISVNVKIAGLESPSKRRESALPDLIPILNSNE
SETETTKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTYLPLENGMPVLVLKDQKD
IALEITVTNNPSDVKNPQKDGEDAYEAKLIANFPDSLTYSAFREMRSYPEKQLTCGANQN
GSQAECELGNPFKRNSNVTFYLILSTTKVNVDTTDLDINLKLETTSTQANLTPITASAKV
VLELLLSVTGVAKPSQVYFGGNIIGESAVKSEDDIGNLIEYEFRVTNLGRPLKTFGTASL
DIQWPKEISNGKWLLYLMKIDSKGLEKVSCQPEGEINSLRVAESHNSRRKREVAEKQITD
GQAFSLFSERKYKTLSCNMNARCVDIKCPLKGFDSKASIVLRSRLWNSTFLEEYSKMNYL
DIVVRASISVPAAAKNVKLTNEVAQVRVTVFPAKPVTLYTGVPWWIIAVAILAGILMLAL
LVFLLWKCGFFRRSRYEDSVPRYHAVRIRKEERQIKDGKSQDLETKQWFTKWNENESYS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcagcaggttcccgtgccgggcgagagcggatggcggccctgctcgtcctc
tacctgcccctcctgccggggctggccggcgccttcaacctggacacggacaacgtgatc
agctggagcggggagacgggcagcctcttcggcttctccctggccatgcaccggcagctg
cagccgcaggagaaacggctattgctggttggagctcctcgggaaaaggcctttccagcc
caacaagccaacagaacaggagggctgtacagctgtgacattgcatctccaaatacaaat
tgcctgcgtgtcaaatttgatgaggagactgacccaaggacggagagtaaagaagaccaa
tggatgggtgtaactgtccagagtcaggggccaggaggaaatgtggtgacgtgcgcacat
cgctatgagaaaaggcagtatgtaaacacagtgcaggaaacccgggatatcattggaagg
tgctatgtgctcagccaggacctcactattaaggatgatatggataatggagtgtggagt
ttttgtgatggtcgtttaagaggccatgagaagtttggttcctgtcagcaaggtgttgct
gctacttttactagagactatcattatattgtgtttggtgccccaggcacttacaactgg
aaaggggtggttcgtgcagagcaaaagaatcagacattttatgatctgggtatctttgat
gatgggccttacgaagttggtgatgagagccgccaggataagaatctagttcctgttcca
gctaacagttacttaggtcttctgtttttgacagctgtatctgatactcatccagatcag
tttgtgtacaaaacattgcctcccagcatacaggtggacaagtcagtggatgtaatgatg
aatagctacttaggtttctctttggactctggtaaaggaattgtctcccaagatgagatg
acttttgtgtctggtgccccaagagcgaaccacagcggagcagtagttttactgaagaag
gaaaaaaatcagagagcactttccctggagcacatgtttgaaggagaagggctggcctcc
tcttttggctacgatgttgctgttgtggacctcaacagtgatggctggcaggacatcgtt
gttggggccccgcagtactttgacagaagcggggacatcgggggtgccgtgtacatctac
atgaaccgccagggcaattgggcaggggtgaagcctctgcgcttaaatggaaccactgac
tccatgtttggacttgcagtagaaaacgttggggacattaatcaggacggatacccagat
attgcagtaggggctccgtacgatggttttggcaaagtatacatttatcatggatccaag
aatggaataaatacgaaaccagcacagattcttgatggtgaaaaaacaaacaccaatttc
tttggttactctattgctggaaatatggacctggataaaaattcctaccctgatgttgct
gttggttccctgtcagattctgtaaatgtgtacagatctcggcctgtgataagcattaga
agaaacattacagtacagcctgatagaattgatctaaagaaaaagaaccctgaggaccat
ggtgaaatcaggatggatgtgaaagcatgttttcaatatactgcaaaccctagagattta
aatccaagaataaagatcaattacacgtttgaagtggaaaatgagaggcggcagctgggc
ctgccctccagggtgcgcttcagtgaccactcctctgatcagttcactgcaagtacaacc
ctcaggggacagaactcatgggagtgtgtcactgcaaagcttatactgcaggagaagatt
aaagataagctacgtcccattccaatatcagtcaacgttaaaattgctggcctggagtca
ccatccaagagaagagagagtgcacttccagatcttataccaattctaaattcaaatgaa
tctgaaacagagaccacaaaagtggagttcttaaaagaaggatgtggagaagacaatgaa
tgtcacagcaacctgaagcttcagtaccggttttgtacgagagagggaaatgaagacagg
tttacttatttaccacttgaaaacggcatgccagtgcttgttctgaaagaccagaaagat
attgccctggaaataactgtgacaaacaatccatctgatgtaaaaaatccacaaaaagat
ggtgaagatgcatatgaagctaaactaattgcaaattttccagacagtctgacatactct
gcattcagagagatgaggagttatcctgaaaaacagctgacatgtggtgctaaccaaaat
ggctctcaagcagagtgtgaacttggaaatcctttcaaaagaaattctaatgtaaccttt
tatctgatcttaagtaccactaaggttaatgttgatacaacagacctagacattaacctg
aagctggaaacaacaagcactcaagctaatttgactccaattacagccagtgctaaagtg
gttcttgaattgcttttatcagtcactggagttgctaagccttctcaggtatattttgga
ggtaacatcattggtgagagtgcagtgaaatctgaagatgatattggaaacctcatagag
tatgaattcagagtaactaacttgggcagaccactgaaaacatttggcactgcttccctg
gacattcagtggccaaaagaaattagtaatggcaaatggctgctttatttgatgaaaatc
gactccaaaggcttggaaaaagtctcctgtcaacccgagggtgaaatcaacagtttgcgt
gttgcggaatcccataactcaagaagaaagcgtgaagttgccgagaagcagattacagac
ggccaggcattctccttattctcagaaagaaaatacaagaccttgagctgcaatatgaat
gcacgctgtgtggatataaagtgtcccctgaaggggtttgacagcaaggcatctattgtg
ctgcgttccaggctgtggaacagcaccttcctggaggaatactcaaaaatgaattacctt
gacattgtggttagggcttctatcagtgttcctgctgcagctaagaatgttaaactcaca
aatgaagttgctcaggtgcgtgttactgtatttcctgcaaaaccagtaaccctttataca
ggggttccatggtggatcattgcagtggctatccttgctggaatactcatgcttgcactc
ttggtattcttactatggaagtgcgggttcttccggcgctccaggtacgaagacagtgtc
ccccgctaccacgctgtaagaattcggaaggaggagcgacagatcaaagacgggaaaagc
caagaccttgagacaaaacagtggttcaccaaatggaacgaaaatgaaagttattcttag
DBGET
integrated database retrieval system
