Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450197
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Entry
135450197 CDS
T09958
Symbol
NHEJ1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
135450197 (NHEJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135450197 (NHEJ1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
135450197 (NHEJ1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
135450197
NCBI-ProteinID:
XP_064574199
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Position
7:29872552..29914354
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AA seq
298 aa
AA seq
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MEGSEELESSLLTQPWASVRFGESSFLAKVCFRDTGYILLISDLSCVWYERAGAEAVGQR
SKELNKRLTVHVSSFLNHLCSLMCPLLAGQPGAATAFSCHRSPSGLRLHVKSELSGLPFY
WDFHCCPAPLDMVCRHLVRPLIQMNLALQCQLQELISLLLQKDAEIEDYRESGATLSRDR
LRTEPFREEAFQQNFVAETLPRICSAGEGQAFASALQQLYTAVTQQELRQARKRHCSEDD
VDRAPTAETMKHPHSPAASQEDETTSSSERTSPASSPAQKPRLPAAKAKPKKAKGLFS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgaggagctggaaagcagcctcctgacccagccctgggcttctgttcgc
tttggtgagtccagttttcttgccaaagtgtgcttcagggataccggctatatcctgctg
atctctgacctcagctgtgtctggtacgagagggcaggcgccgaggctgtgggacaaagg
tccaaggagctgaacaagcggctgactgtccacgtgtcctccttcctgaaccacttgtgc
agcttgatgtgccccttgctggcagggcagccaggtgccgccactgccttctcctgccac
cgctctcccagtggcctcaggctgcacgtgaagagcgagctgtcaggactgcccttctac
tgggacttccactgctgcccggctcccctggacatggtgtgccgtcaccttgtgcggccc
ctgatccagatgaacctggcgctgcagtgccagttgcaagagctgatttccctgctgctc
cagaaggatgctgagattgaagattacagggagagcggagccactctcagcagagaccgc
ctgcggacagagcccttccgggaggaggcgttccagcagaacttcgtggctgagaccctg
ccccggatctgcagtgcgggagaagggcaggcgtttgcctctgctctgcagcagctctac
actgcagtgacacagcaggagctcaggcaggctcggaaacgccattgctctgaggatgac
gtggatagagcacccactgcagaaaccatgaagcacccccattcacctgctgcatcccag
gaggatgaaacaacatcttccagcgagagaacctcgccagcctcctctccagctcagaag
ccccggctgcctgcagccaaggccaagccaaagaaggcaaaagggctcttcagctga
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