Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450379
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Entry
135450379 CDS
T09958
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
135450379 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135450379 (XRCC5)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
135450379 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
135450379
NCBI-ProteinID:
XP_064574519
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Position
7:complement(31261882..31311681)
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AA seq
727 aa
AA seq
DB search
MAPSGKVAVVLCLDVGLTMSSSSPGEESSLDQAKKIMTKFVQRQVFAESKDEVAVVLFGT
NGTRNGLASEDQYQNITVHRSLMLPDFDLLEDIQNMIKAGSAQADFLDAIIVCMDLLQKE
TIGKKYEKRHIELFTDLSSPVSEDQLEIIIANLKKTGTSIQFFLPFPVSVDDGSGDKSAS
VHAHMHKNSFPMKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKMER
KPMPWPCQLTIGPNLSIRIVAYKSVTEERVKKLWAIVDAKTLRREDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTRSSQIQRHYYMGNQAL
KVFAAKDDANAAVAFSALVRALDELKVVAVVRYAYDRRCYPQIGVAFPYIKDTYECLIYV
QLPYMEDLRQYVFSSLKNSKKCIPTVDQLSAVDSLIDSMNLVHEDGETFEDLFKPSKIPN
PHFQRLYQCLQHKAFHSDKPLPPIEQHLLEMLEMPCVVRERCQAPLERVKALFPLKEVGK
KKEEKTAQDIFKDNEDEPSLKKPKIEDEEEGFSLMKLAEGNITSVGSVNPAEDFRILVRK
KNADFKDVSQQLKNRIDQFLENKGSQYYMKGINCIRAFREEAMKLSKVQCFNDFLQALKS
KLEDKALSDFWEIMVQERISLITKDEAEGSLVTGEEAEKFLAPKEEKNETLPPTDEGGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagcggcaaggtggcagtagtgctgtgcctggatgtaggccttacaatgagc
agttcttcccctggtgaagagtcttcacttgaccaagccaagaagattatgacaaagttt
gtgcagagacaggtttttgctgagagtaaagatgaagttgctgtagttctgtttggcact
aatggcactagaaatggccttgccagtgaggatcaataccaaaacattactgtacataga
tcactgatgctgccagattttgatctgctggaagacattcaaaatatgattaaagcaggc
tctgcacaagcagactttctggatgctattattgtgtgtatggacttgcttcagaaagaa
acaataggaaagaaatatgagaagagacacattgaattgtttacagaccttagtagtcct
gtcagtgaggatcagctggaaattatcattgctaacttgaagaaaacaggaacttcaatt
cagttttttctgccattcccagtgagtgttgatgatggaagtggagataaaagtgccagt
gtacatgctcatatgcacaaaaactcttttccaatgaagggtttaactgaacaacaaaag
caaggtattgatgtggtgaggaagctcatgtatactttggatgaagaaggagggctggaa
gaaatttatactttcagagagagcctggaacgcctttcaatgtttaagaaaatggaaagg
aagccaatgccttggccctgccaactcactattggtcctaatttgtctataaggattgtg
gcctacaaatcagtcacagaggagagggtgaaaaaactttgggcaattgtggatgctaaa
accctcagaagagaggatgtgcaaaaagagactgtttactgcttgaatgatgatgatgag
acagaggttcagaaagatgatactattcaaggttttcggtatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaaggaaagtgtttttctgtt
ttgggattcactagatcctcacagatccagaggcattactacatgggcaaccaagctctg
aaggtctttgcagcaaaggatgatgcgaatgcagcagttgctttttctgcacttgttcgt
gcattggatgagttgaaagtggtggctgtagtgcgctatgcttatgatagaagatgctat
ccacaaattggagtagcttttccatatattaaggatacatatgagtgtctcatctatgtg
cagctaccctatatggaagacttaagacagtatgtattttcatccttgaaaaacagtaaa
aaatgcattcctacagtggatcagttatctgctgttgactcactgattgattctatgaat
ttggttcatgaagatggagaaacttttgaggacctatttaagcccagcaaaattccaaac
cctcactttcagagattatatcagtgtttgcagcacaaggcttttcactctgataagcca
ctgccaccaatagaacagcatcttttagaaatgctagagatgccttgtgtggtaagagaa
aggtgtcaggctcctctggaaagagtaaaagcgcttttccccctaaaggaagttggcaag
aaaaaagaagagaagactgcacaagacatcttcaaagacaatgaagatgaacccagtctt
aagaaaccaaaaattgaagatgaggaagaaggctttagccttatgaaacttgctgaaggc
aatatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaag
aaaaatgctgacttcaaagatgtgagtcagcagttgaaaaaccgcattgatcagttcttg
gaaaacaaaggttcccagtactacatgaaagggatcaactgtatcagagcttttagagag
gaggccatgaagctgtccaaggtgcagtgttttaatgactttctgcaggcactgaaatca
aagttggaagataaagccttatctgatttctgggagatcatggtgcaagaaaggatttct
ttgatcactaaagatgaagcagaaggaagtttggtgacaggtgaagaggctgagaagttc
ttggctccaaaggaagagaaaaatgaaactctgcctcctacagatgaaggtggtgatgtt
gatgatctgctggacatgatgtga
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