Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450524
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Entry
135450524 CDS
T09958
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135450524
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135450524
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
Lustrin_cystein
Chlamy_scaf
New_glue
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
135450524
NCBI-ProteinID:
XP_064574875
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All DBs
Position
7:27086340..27175311
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AA seq
2014 aa
AA seq
DB search
MEQSVLVPPGPDSFQFFTRESLAAIEQRIAAEKAKNPKPDRKDDDENGPKPNSDLEAGKT
LPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTIG
ENGTLLNSTVAPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPSA
GGEAGGLSESSSDASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRK
GFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFAD
DEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVS
LVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTEPEMRKRISGSFHVSMDFLEDPALRER
AMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDL
AITICIVLNTLFMAMEHYPMTEEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGW
NIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNNL
QIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVELSKD
HDYIKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEF
SSESDLEESKEKLNSSSSSEGSTVDIGLPAEEQPEVEPEEAQEPEACFTEGCVRRFKCCQ
VSIEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLE
YADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFKG
WMDIMYAAIDSRDVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILICL
NMVTMMVETDDQSEEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVI
LSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKRK
QEEVSAVIIQRAFRRHLLKRTVKQASFIYNKNKTEGGGAGQGLKDEILIDKLHENSFTEK
TDITASTAVCPPSYDRVVRPVKEKHEKEDKDGQK
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaattcttcactagagag
tctcttgcagctattgaacagcgcattgctgcagaaaaagccaagaaccccaaaccagat
cgcaaagacgatgatgaaaatgggccaaaaccaaacagtgacttggaggcaggaaaaaca
ctcccatttatatatggtgacatacctccaggaatggtgtctgagcccttggaagacatg
gacccatattacatcaataaaaaaacctttatagtattgaataaagggaaggcaatcttc
cgattcagtgccacctctgccctgtacattttaacacccttcaaccctcttaggaaaata
gctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttgacc
aactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatatact
ttcactggcatttacacatttgagtcactaataaaaatcattgcaaggggcttttgctta
gaagattttacttttcttcgagatccgtggaactggcttgatttcactgtcattaccttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagctttgaaaacaatatcagtcattccaggcctgaagaccattgtaggagccctg
attcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagtgta
tttgcgctgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcagtgg
cctccagaaaattttactttggaaacaaatattacttcccagctaaacagcaccataggt
gaaaatggtacattgcttaattcaacagtggctccgtttgactggaaggggtacattgaa
gatgaaagtcatttttattttctggaagggcaaaatgatgctctgctttgtggaaatagc
tctgatgctgggcagtgcccggaaggatatacttgcgtgaaagcgggcagaaaccccaat
tatggctacacaagttttgacaccttcagctgggctttcttgtcactgtttcggctaatg
actcaggacttctgggagaacctctatcaattgactcttcgtgctgctgggaagacatac
atgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatcctg
gctgtggtggccatggcctatgaagaacagaaccaggcaaccttggaagaagcagagcag
aaggaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagcacag
gcggcagcagtggcagcagcagcagtaacagcatctgcagagtccagggagcccagtgct
ggaggagaagcaggagggctctcagaaagctcctcagacgcatcaaaattgagctcaaag
agtgcaaaagagaggagaaatagaaggaaaaaaaggaaacagaaagaacagtctggagga
gaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaaggaaa
ggtttccgattgtctattgaaggcaatagactgacgtatgaaaagaagtattcttctccg
catcagtctttgctgagcattcgtggctccctgttttccccaaggcgcaacagcagaaca
agtcttttcagcttcagaggtcgagcaaaggatgtagggtcagaaaatgactttgctgat
gatgagcacagcacttttgaagacaacgacagcagaagagattctctctttgtgccgcgc
aggcacggagaacggcgcaacagcaacatcagccaggccagtaggtcatccaggatgctg
gcagtgtttccagtgaatgggaagatgcacagcaccgtggattgcaatggggtggtttcc
ctggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtgata
atagataaaccagctactgatgacaatggcaccacgacagaaccagaaatgaggaagaga
atatcaggttcttttcacgtgtctatggacttcctggaagatccagctttaagggaaaga
gccatgagtattgcaagcatcctcacaaacactgtggaagaacttgaagaatcgagacag
aaatgcccaccatgttggtataaatttgcaaatattttcttgatctgggactgcagtcca
cattggttaaaagttaagcatatcgtcaacttagtggtaatggacccgtttgttgacctg
gccattaccatttgcattgttttaaatacactctttatggctatggagcattatccaatg
accgaagaattcaataatgtactttcagttggaaatctggtcttcactggaatcttcaca
gcagaaatgtttctcaagataattgcaatggatccttactattatttccaggaaggctgg
aatatttttgatggctttattgtaactcttagcttggttgaacttggtcttgcagatgtg
gaaggactatctgttcttcggtcattcagattgttacgagttttcaaattggcaaaatcc
tggccaacactaaatatgttgataaaaatcattggtaattccgtgggagctctggggaat
ctgaccctggtgctggccatcattgtgttcattttcgctgtggttgggatgcagctcttt
gggaaaaactacaaggaatgtgtctgcaaaattgcaagtgactgtgtgctccctcgctgg
cacatgcaagatttcttccactctttcctgattgtattccgagtgctgtgtggggaatgg
attgaaaccatgtgggactgcatggaggttgctggccaagccatgtgccttacagtcttc
atgatggtcatggtgattggaaacctagtggtactgaacctatttttggccttgctcttg
agctcatttagtgcagacaaccttgctgtgacagatgacgataacgaaatgaacaatctc
cagattgctgtggcaagaatgcagaaaggcatagattatgtgaagagaaaagcacgagaa
ttcatccaaaaagcctttgttaaaaaacagaaagctttagatgaaatcaagccacttgaa
gatttaaacaacaaaaatagctgtatttctaaccatacaaccgtggaactaagcaaggac
catgactatattaaagatgcaaatggaaccaccagtggtataggcacaggcagcagtgtg
gaaaaatacataattgatgagagtgattacatgtcattcataaacaacccaagcctcact
gtgacagtgcccattgctgtgggtgaatccgactttgaaaatctaaacacagaagaattt
agtagtgaatcagacctggaagaaagcaaagagaagttaaattcatctagttcatctgaa
ggcagcacagttgatattggacttcctgcagaagaacaaccagaagttgaacctgaagaa
gcccaggagccagaggcctgcttcacagaaggctgtgtaagaaggttcaagtgctgtcaa
gtaagtatagaagaaggaagaggaaagcagtggtggaaccttagaaaaacctgcttcagg
attgttgaacacaactggtttgagactttcattgtctttatgattctcctcagtagtgga
gctctggcttttgaagacatatatattgaacaacgtaaaactatcaagaccatgctggaa
tatgctgacaaagtcttcacttacatcttcattctggaaatgctgctgaagtgggtggcc
tatggctaccaaacatattttactaatgcctggtgctggctggacttcctgattgtcgat
gtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgccattaag
tcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggcatg
agggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctcgtt
tgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaagttc
tactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaatttt
agtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaagta
aactttgataatgtaggatttgggtatctttctttacttcaagtagctacatttaaaggc
tggatggatattatgtatgcagctattgactcaagagatgtgttagatcaacccaagtat
gaagacaacttgtatatgtacttgtattttgtcatctttataattttcgggtcttttttc
accctgaatttgttcattggtgtcattattgacaacttcaatcagcaaaaaaagaagttt
ggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgctatgaaaaag
ctgggatccaaaaaaccacaaaaacctataccaagaccagggaataaattccaaggaatg
gtctttgattttgtgacacagcaagtatttgacatcagcatcatgattcttatttgtctt
aacatggttaccatgatggtagaaactgatgaccagagcgaagaaatggaaaatatttta
tactggataaacctcgtgttcattgtccttttcactggagaatgtgttctgaaattaatt
tcacttcgccattactacttcactataggctggaacatttttgattttgtggttgtcatt
ctctctatagtaggaatgtttttggctgagatgattgagaagtactttgtatctcccaca
ctattcagagtcatccggcttgccaggatcggtcgaatcctgcgcctcattaaaggcgct
aagggaatccgcactctgctttttgctttgatgatgtctctccctgctttgttcaacatt
gggctgctgctcttcctggtcatgttcatctatgccatatttggcatgtccaactttgcc
tatgtcaagagagaagctgggattgatgacatgttcaactttgaaacgtttggcaacagc
atgatctgcctgttccagatcaccacgtccgctggctgggacggtttgctcgccccaatt
ctcaacagtggggagccggactgtgaccccaacaaggctcatccagggagctctgtgaaa
ggtgactgtggcaacccttctgttgggattttcttctttgtcagctacattatcatatct
tttctggtagtggtgaacatgtacattgctgtgattttggagaacttcggtgttgctact
gaagaaagcgctgagcccttgagtgaggatgactttgagatgttctatgaagtctgggag
aagtttgatcctgatgcaacgcaattcatggaatttgagaaattgtctgattttgcagca
gcacttgagcctcctcttcatctacccaaacctaacaaagtccagctcattgcaatggat
ctgcccatggtgagcggtgacagaattcactgccttgacatcttgtttgctttcacaaag
cgtgttttgggggaaagtggggagatggacgccctcagaatacagatggaagatcggttt
atggcatccaatccttctaaagcttcctatgaaccaattacgactacattgaaaagaaaa
caggaagaagtgtctgctgtcatcatccagcgtgctttcagacgtcacctcttaaaacga
acagtaaaacaagcttcctttatctacaacaaaaataaaactgaaggtgggggggctggt
cagggtttgaaagatgaaatccttattgacaaattacatgaaaactcatttacagagaaa
acagacataaccgcatcaacagcagtttgtccgccttcttatgatcgtgtagtaaggcca
gtcaaagaaaagcatgaaaaggaagataaagatggtcagaaataa
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