Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450560
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Entry
135450560 CDS
T09958
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04145
Phagosome
zle04148
Efferocytosis
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
zle04810
Regulation of actin cytoskeleton
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135450560 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135450560 (ITGB5)
04148 Efferocytosis
135450560 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135450560 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135450560 (ITGB5)
04810 Regulation of actin cytoskeleton
135450560 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135450560 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135450560 (ITGB5)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135450560 (ITGB5)
Cell adhesion molecules [BR:
zle04515
]
Integrins
Integrin beta subunits
135450560 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
DUF2975
WD40_Apc4_C_fungal
Motif
Other DBs
NCBI-GeneID:
135450560
NCBI-ProteinID:
XP_064574931
LinkDB
All DBs
Position
7:complement(35934623..35992628)
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AA seq
811 aa
AA seq
DB search
MPRRGGLPAPAAARRPPPLLLLRLLLLAAPLQPGRGLNLCTSGSATSCEECLLIHPKCAW
CSKEDFSSTKSITSRCDFLQNLLANGCAGAIESPSSSISVLRNVPLSSKGSGQSHLDVTQ
ITPQKVALSLRPGDRTSFRVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFSSCVPSFGFRHLLSLTDKVD
RFNEEVRKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGK
LGGLVQPHDGQCHLNEVNEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKNHYMLYKNF
TTLIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDSPEDIGLTFTATCQDGLSYP
GLRKCGDLKIGDTVSFEVSVEARSCPAEAASHSFTIKPAGFRDTLEVAVSYRCQCGCTGW
AAPASAKCSGNGTYACGLCECEPGYLGARCECREGAMGELHHALCREAEGKPLCSGRGEC
SCNQCQCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGFIGDNCNCS
TETDSCVSSDGQMCSGRGACVCGRCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFN
SGRLADNQTCQKHCKDEIITTVDVLETDDPNAILCAYPVNNCVMKFTYMELPSGKSNLTV
LKEPACSSAPSAVTIVLAVIGSVVLIGIILLALWKLLVTIHDRREFDRFQSERSRARYEM
ASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgccggcccccgccgccgcccgccggccccccccgctcctc
ctcctgcgcctcctcctcctggccgccccgctgcagcccggcagaggtctcaatctgtgc
accagtggcagcgccacgtcctgtgaagagtgtctcctcatccatcccaagtgtgcctgg
tgctccaaggaggatttcagcagcacgaagtccatcacgtcccggtgtgacttcctgcag
aacctgcttgcgaacggctgcgccggagccatcgagagccccagcagcagcatcagcgtg
ctgaggaacgtgcccctgagcagcaagggctctggccagagccacctggacgtcacacag
atcactcctcagaaggtggccttgagtcttcgccctggtgaccggacctcgttccgagtg
caggtgaggcaggtggaggattaccccgtggacctctactacctgatggacctgtccctg
tccatgaacgacgacctggacaacatccgcaacctgggcaccaagctggctgaggagatg
aggaagctcaccagcaacttccgtctgggctttggctccttcgtggacaaaaacatttct
cctttctcctacacggcaccaagataccaaaacaatccctgcattggttacaagctgttc
tccagctgtgtcccctcctttggcttccgccacctgctgtccctgacggacaaagtggac
cgtttcaacgaggaggtccgcaaacagaaagtgtcccgcaaccgagacgctcccgagggc
ggcttcgatgccattctgcaggctgctgtctgcaaggagaagatcggctggcgtaaggag
gcatcccacctgctggtcttcaccacggatgatgtgccccacatagccctggatgggaag
ctgggggggctggtgcagccccacgatgggcagtgccacctgaacgaagtcaacgagtac
agcgcgtccagccagctggattatccttccctggcacttcttggggagaaacttgctgaa
aacaacatccacctgattttcgctgttacaaaaaatcattacatgctctacaagaacttt
accactttgatccctggaacaacagtggagattttgcacaaagattccaagaatatcatt
gagctgattgtcaaagcctacaacagtattcggtccaaggtggagctcacagtctgggac
agccctgaggacattggcttgaccttcacagccacctgccaggatgggttgtcctatcct
gggctcaggaagtgtggggacctcaaaattggagatacggtttccttcgaggtgtccgtg
gaggcgcggagctgcccggccgaggccgcgtcccacagcttcaccatcaagccggccggc
ttccgggacacgctggaggtggccgtgagctaccgctgccagtgtggctgcacgggctgg
gccgcgcccgccagcgccaagtgcagcggcaacggcacctacgcctgcgggctgtgcgag
tgcgagcccggctacctgggcgcccgctgcgagtgccgtgagggcgccatgggcgagctg
caccacgcgctgtgccgcgaggccgagggcaagcccctgtgcagcggccgcggcgagtgc
agctgcaaccagtgccagtgctacgagagcgagttcggcaacatctacgggcccttctgc
gagtgcgacgacttctcctgcgccaggtacaagggagtcctctgctcaggtcacggggag
tgtcactgcggggagtgcaagtgccacgcggggttcatcggggacaactgcaactgctcc
acggagacggacagctgcgtgtccagcgacgggcagatgtgcagcggccgcggcgcctgc
gtctgcgggaggtgccagtgcaccgagcccggggcgttcggagagacctgcgagaagtgt
cccacctgccccggtgtctgcagcaccaaaagggattgtattgagtgcaagctgtttaac
tcaggaagactggctgataaccaaacctgccaaaagcactgcaaggatgagatcatcacc
actgtggatgttcttgaaacagatgaccccaacgcaatcctctgtgcctacccagtgaac
aactgtgtcatgaagttcacctacatggagcttcccagtgggaaatccaacctcaccgtc
ctcaaggagccagcctgcagctcagcccccagcgctgtgaccatcgttctggcagtgatt
ggcagcgtggtgctgattggcatcatcctgctggcgctctggaagctgctcgtcaccatc
cacgacaggcgggagttcgaccgattccagagtgagcgttcccgcgccagatacgaaatg
gcatccaatcctctctaccgaaagcccatttccacgcataacgtagagttcacattcaac
aagctcaacaagtcttacaacggtacagttgactga
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