Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450572
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Entry
135450572 CDS
T09958
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135450572 (DDX18)
03009 Ribosome biogenesis [BR:
zle03009
]
135450572 (DDX18)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135450572 (DDX18)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135450572 (DDX18)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
90S particles
Helicases
135450572 (DDX18)
Pre-60S particles
135450572 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
135450572
NCBI-ProteinID:
XP_064574941
LinkDB
All DBs
Position
7:8590200..8599543
Genome browser
AA seq
645 aa
AA seq
DB search
MSVPATASNLPMRLLRRKIHKRNLKLRQRNLKLQAAQGAVPSPSEAASQGPPEEEEVEEA
AVPEEDAAAEEGAEPADGAGHRSGEKKKKKKKKRKAMANGGDDIETKKAKTEEEESAEAE
DGDKQDSGEKEEEEEDEVPSLPLGVTGAFEDNSFASLAGCVSENTLKGINDMGFTHMTEI
QHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAM
QTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYK
NLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLY
VGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELL
NYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDD
PKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQL
EKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVCLSFGFKVPPFVDLNV
NSNHGRRLQKRGGGGGFGYQKPKSVHKAKIFKHISKKSDNRQFSR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgccggctactgccagcaacctgcccatgcggctgctccgcaggaagatccac
aagcgcaacctgaagctgcggcagcgcaacctgaagctgcaggcggcgcagggggcagtg
ccctcgccgagcgaggcggcttctcagggacccccggaggaggaggaggtggaggaggcg
gcggtgccagaggaggatgcagcggccgaggagggcgcggagcctgcggacggagccgga
caccgcagcggggaaaagaagaaaaagaagaagaaaaagagaaaagcgatggccaatgga
ggagatgatatagaaaccaaaaaagcaaaaactgaagaagaagaatctgcagaggcagaa
gatggagataagcaggactctggagagaaggaagaggaggaggaggatgaagtgcccagt
ttgccactgggtgtaacaggtgcttttgaagacaattcctttgcttccctggctggttgt
gtcagtgagaatacactgaaaggcataaacgacatggggtttacacacatgaccgaaatt
cagcataaaagtattaaaccccttctggaaggcagggatattttagcagctgcaaaaaca
ggcagtggaaaaacactcgcatttctcattcctgctgtagagctcatctacaagctgaaa
ttcatgcctaggaatggaacaggtgttattattctttctcctacccgagagctggctatg
cagacctatggagttcttaaggaactcatgaatcatcacgtccatacctatggtctgata
atgggcggcagtaacagatcagcagaagcacagaagcttggaaatggaatcaacatcatt
gtagccacaccaggaagactgctggatcatatgcagaacactccaggtttcatgtacaag
aacttgcagtgtttggtaattgatgaggcagatcgaatcttggaggttggatttgaagaa
gaaatgaaacagatcataaaacttttaccaaagcgcagacagacgatgcttttctctgcc
acacaaaccagaaaggtggaagatctggccaagatctctctgaagaaagagcccctgtat
gttggggttgatgataacaaggagacagcaactgtagatggtctggagcagggttatgtg
gtctgtccatctgaaaaaagattccttttgctcttcacattcctcaagaagaaccggaag
aagaaactgatggtgtttttttcttcatgtatgtcagtgaaataccactatgaattactc
aactacattgatctgcctgttttggccattcatggcaagcagaaacagaccaaacgtact
acaacgtttttccagttctgtaatgcagagtctggaatactgctgtgcacggatgtggct
gccagaggattggacattcctgaggttgactggattgtccagtatgaccctccagatgat
ccaaaggaatatatccatcgtgttggtaggactgccagagggataaatgggagaggacac
gctctgctcatcttgagaccagaagaactgggcttccttcgttacctgaaacaggccagg
gtaccactaagtgaatttgaattttcttggtcaaaaatctcagacatccagtctcagctg
gaaaaactgatagagaagaactacttccttcacaagtcagcccaggaggcttacaaagct
tacatcagagcttatgactcccattctctgaagcagatctatgatgtcaataacttggat
cttcccaaagtctgcctttcctttgggtttaaagttcctccgtttgttgacctcaatgtg
aacagcaaccatggcagaagactacagaagagaggtggaggtgggggatttggctaccag
aaaccaaagagtgtccacaaagcaaaaatcttcaaacacatcagcaagaaatctgacaat
cgacagttttctcgttaa
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