Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450646
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Entry
135450646 CDS
T09958
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135450646
Peptidases and inhibitors [BR:
zle01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
135450646
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
135450646
NCBI-ProteinID:
XP_064575094
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Position
7:complement(26269334..26303416)
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AA seq
1246 aa
AA seq
DB search
MFLRFWWLLWILEHHEFLAENLREEKIYGLRRSKPKYILSNIVEKYPSSSDQDDDCILEI
AFLLDSSESAKDYNHEQQKRFVLQTVDRMKSLQLSSGRTLRWRMALLQYSSTVFIEQTFH
DWKGPEAFKSHIAPITHIGHGTYTTYAITNLTQLYMSEGTVGSVKVAVLFTDGVDHPRNP
DIFAAAADAKHQGIVFFTMGMTRVAEEVSNAAKLRLLASVPASRFVFNLQEKGTVEKVLK
EMKDLSEEECPQVDTCNCEKGERGLPGPAGKKGRTGDDGAPGLKGAKGDPGLNGIPGRDG
IEGKSGYKGEKGERGECGIPGIKGERGPEGPVGPRGVRGIQGLPGQSGDQGPEGLQGSKG
ERGLPGPPGLPGETGVGLPGPKGDIGLTGRPGPVGPPGIGEPGFMGPQGPQGVQGERGSP
GEGLPGAKGDRGFDGPRGPRGLPGISIKGDKGECGPPGLPGSAGLPGIGIQGEKGVEGPK
GPPGSRGLPGQGIPGPKGEQGLPGETGVPGERGIGEPGSKGDPGPSGLAGLPGLPGEDGA
PGQKGEPGLPGLRGPEGAPGIGIQGEKGDQGQRGIRGLTGPTGMPGPVGAKGEPGAPGRL
GMPGPPGRSVPGPKGDIGLPGLAGPIGEPGFGLPGAKGDQGLPGPPGPFGQKGDGYPGPP
GLPGLPGIPGEQGPDGVGLPGPKGDPGSRGPAGPAGPPGKGLPGPKGSIGRPGPPGSLGP
PGEGIQGTKGEQGIQGMPGPRGPPGDGLLGEKGDRGATGDKGKKGEKGDVGDPGLSGEPG
KMGPKGDQGLTREDIIKLIKEICGCSIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTA
LVDRVTVGRNATRVGLVLYSLEARLEFGLNKYPTRQDVKRAIRKMQYMGEGTYTGTAIRK
ATQEGFSAARAGVRKVAIVLTDGQTDKREAVKLGLAVREAHAANIEMYAIGIVNTSDPSQ
AGFVRELNVIASDPDGEHMYLIDDFNTLPALESKLVSQFCEDEHGTLVYNHNENGASISG
QSFQSVSPSSLHYILQKNNGNRQSLPAQTLRVSTTNVPPVVYDAYEEEQDEEQQPTLLAG
NTRAVLPLFSSKQPPSNKGITSSLSAAGPTPRPESPAGLRCQLRLEQGPCRAYTIRWYYD
TQANACAQFWYGGCQGNANRFESEQECTQACVVFSGANGNVKHTNKKRSLASTKTPSPLV
LSEPSAPLLTGPQGGRGISRPLLYFIQLVSISRWLQRAPRQPRDKL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcagattctggtggcttttgtggatacttgaacatcatgagtttttagcagaa
aatctcagggaagagaagatatatggattgagaagatcaaaacctaaatacattctgtca
aatattgtagaaaaatatcccagctcaagtgatcaagatgatgattgcattctggaaatt
gcctttttactggacagctccgaaagtgctaaggactacaatcatgaacaacagaaaaga
tttgtactgcaaacagtagacagaatgaaaagtctgcagcttagttctggacgtaccctg
cgctggaggatggccctacttcagtacagcagcactgttttcatagagcaaactttccat
gactggaaaggtcctgaagcattcaaatcccacattgctcccatcacccacataggccat
ggcacctacacaacttatgctataacgaatcttacccagctctacatgtctgaagggact
gtgggtagtgtcaaagtagccgtgcttttcactgatggagtggatcatccaagaaaccca
gacatttttgcagctgcagctgatgctaaacaccaaggaattgtatttttcacaatggga
atgaccagagtggctgaggaggtcagcaatgctgccaagctccggctcctggccagtgtc
ccagcatcccggttcgttttcaacctccaggagaaaggaactgtggagaaggttctcaaa
gaaatgaaagacctgtctgaggaagagtgtccccaggttgacacatgtaactgtgagaag
ggggaaagaggccttcctggtcctgctggtaaaaagggtcgcactggggacgatggagct
ccaggcctgaaaggagcaaagggggacccaggtcttaatggaatcccaggacgagatgga
atagaggggaaatctggatataaaggagagaagggtgaaagaggtgaatgtggaatccca
ggaataaaaggagaaagaggccctgaaggtccagtaggccccagaggagtcagagggata
cagggtctgccaggacaatctggagatcaagggcctgaaggtctgcaaggatcaaagggt
gaaagaggtctccctgggccacctggcttgcctggagaaactggagtaggattgccaggc
ccaaagggtgacattggtttgacaggaagaccaggccctgttggcccacctggaattggt
gaaccaggatttatggggcctcaaggaccacaaggtgttcaaggagaaagaggctcacca
ggagaagggcttccaggagcaaagggagatcgtggctttgatggacctagaggccctcgt
ggacttccaggcatcagcataaaaggtgacaagggtgagtgtggtccccctggtttaccg
ggatcagctggattacctggaattggaattcaaggagaaaagggagtggagggcccaaaa
ggaccacctggctctagagggctaccaggacaggggatacctggaccaaagggtgaacaa
ggcttgccaggagagactggagtgccaggagaaagaggtattggagaacctggttctaag
ggtgatccagggccttcaggactggcaggtctgcctggtcttccaggagaagatggagcc
cctggacaaaagggtgaaccagggttgcctggtcttagaggtcctgaaggtgctccaggg
attggaatacagggggaaaagggagatcaaggacagagaggaatacgtggactaacagga
ccaacaggaatgcctggacctgttggagctaaaggagagcctggtgcaccagggcgtctt
ggaatgccaggccctcctggaagatctgtgcctggaccaaagggtgacattgggttacct
ggtcttgctggaccaattggagaaccaggttttgggcttcctggggcaaagggtgaccaa
ggcctcccaggaccccctgggccctttgggcaaaaaggagatggttatcccggcccacct
ggcttgccaggcctccctgggattcccggtgagcaaggcccagatggagttggactacca
ggacctaagggtgatcctggtagtagaggaccagctggccctgctggtcccccaggaaaa
ggcttgccaggaccaaaaggaagcataggacgcccggggccacctggctctctgggacct
cctggtgaaggcattcaaggaactaagggggaacaaggcattcaaggaatgccaggacca
cgaggcccccctggagatgggcttctgggagagaagggagatcgaggagctacaggtgac
aaggggaaaaaaggagaaaaaggtgatgtgggtgaccctggtttatctggagaacctggc
aagatgggaccaaagggagaccaaggcctaacaagagaagatatcattaaattaataaaa
gagatatgtggttgcagtattaaatgtaaggaaattcctatggagcttgtatttgtgatt
gacagctctgagagtgtgggaccagaaaattttgaaattatcaaagactttgtaactgct
ttagtagacagagtaactgtaggcagaaatgctaccagagttggccttgtgctgtacagt
ttagaagctcgcctagaatttgggctcaacaagtacccaacccgccaggatgtcaagcga
gcaattagaaaaatgcagtacatgggagaaggcacttacacaggcactgccatccgcaaa
gccacccaggaaggattttctgctgctcgagcaggggtgaggaaagtggctattgtgcta
acagatggccaaacagacaagagagaagctgtaaaactgggccttgctgttcgagaggcc
cacgcagcaaacatcgaaatgtacgccataggaatcgtaaatacttcagatccaagccag
gctgggtttgtgcgggagctgaatgtgattgcttcagacccagatggagagcacatgtat
ctcattgatgacttcaacaccctcccagctctggagtccaaattagtcagtcaattttgt
gaagatgaacatggcaccttagtatacaaccataatgaaaatggtgcaagcattagtggg
caatccttccagtcagtatctccaagttcgttacactacatacttcagaagaacaatggt
aacagacaatcactgccagcacagacactcagggtatctacaaccaacgtacctcctgta
gtctatgacgcctacgaagaggaacaagatgaagaacaacagccaaccctgctggcagga
aacactagagctgtgttaccattattttcatctaaacaaccaccatccaataaagggata
acatcatctctctcagctgcaggccccacaccaagacctgaaagtcctgcgggcctgcgc
tgccagctgcggctggagcaagggccgtgccgtgcgtacacaatcagatggtactatgac
acacaagccaatgcctgtgctcagttttggtatgggggctgccagggaaatgccaaccgc
tttgagtctgagcaggaatgcacacaggcttgtgtagttttttctggagcaaatggtaac
gtcaagcataccaacaaaaagcggagtttggcctcaactaaaacaccctccccgcttgtg
ctctcggaaccctcagcccctctcctcacgggcccacagggaggtcggggcatttcccgc
ccgctgctctatttcatccagctggtgtccatctccagatggctgcaacgggctcctcgc
cagcccagggacaagctttag
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