Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450759
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Entry
135450759 CDS
T09958
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135450759 (FUBP1)
03041 Spliceosome [BR:
zle03041
]
135450759 (FUBP1)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
135450759 (FUBP1)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135450759 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
135450759
NCBI-ProteinID:
XP_064575255
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All DBs
Position
8:18965943..18999038
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AA seq
652 aa
AA seq
DB search
MADYSTVPPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTAMNSNDYGYGG
QKRPLEDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQI
SRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGP
GNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYK
VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQN
DAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR
GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPN
MKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPMG
PYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYA
HYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPAG
APPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgccgcgggcgcgcccgggggaggtggtggc
ggggctggaggagtgaacgatgcctttaaagacgcgctgcagagggctaggcagattgca
gcgaaaattggaggagatgctggcacagcaatgaattcaaacgactacggttatggaggg
cagaaaagacctctcgaggatggagatcaaccagatgctaagaaagttgctccccagaat
gactcttttggaaatcagctcccaccgatgcatcagcagcaaaggtctgtgatgacagag
gagtacaaagttccagatgggatggttggattcatcattggcagaggtggagagcagatc
tcgcgcatacagcaggagtctggctgcaaaatacagattgcacctgatagtggaggcctg
cctgaaagatcatgtatgctaactgggacaccagagtctgttcagtcagcaaaaagattg
cttgatcagatagttgaaaagggaagacctgcacctggatttcatcatggtgatggacct
ggaaatgcagtccaagaaattatgattccagcaagtaaagcaggattagttattgggaaa
ggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgattcag
gatggcccacagaacactggtgcagacaagccccttaggataactggagacccttacaaa
gttcagcaagccaaggaaatggtgctggagttaattcgcgaccaaggtggctttagagag
gtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaatacca
cgatttgctgtaggtattgtaattggaagaaatggagagatgattaagaagatccagaac
gatgctggggttaggattcagttcaagccagatgatggaacaactccagatagaatagcc
cagatcacagggcctcctgacagatgtcagcatgctgcagaaatcattacagatctcctt
cgcagtgttcaggctggtaaccctggtgggccaggacctggtggtcgaggaaggggtaga
ggccaaggcaactggaacatggggcctcctggtggattacaggagttcaattttattgtc
cctactggcaaaactggattaatcattggaaaaggtggtgaaactattaaaagtataagc
caacagtctggtgctagaatagaacttcagagaaatcctccacctaatgcagatccaaac
atgaagatgtttactatccgtgggacaccccagcaaatagattatgcacgacaacttata
gaggaaaagattggaggtccagtgaatccgttgggtcccccggttccccatggtccccat
ggtgttgttcctggcccacatggacctcctgggccgccgggtcctggtgctcccatgggc
ccctacaacccagctccttacaacccaggccctcctggtcctgcccctcatggtcctcca
gctccatatgctccacagggatggggaaatgcttatccacactggcagccaccaaaccca
ccagacccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattatgct
cactattaccagcagcaagcacagccaccacctgcagcccctcctggtggaccagctaca
acccaaaccaatggacaaggagatcagccaaatccagcaccagcagggcaggttgactat
accaaggcctgggaggagtactacaaaaaaatgggtcaagccgtgcctgcccctgctggg
gctcctccgggcgggcagccggattacagcgcggcgtgggccgagtactaccggcagcag
gcagcgtactacgcccagacaagtccccagggaatgccccagcatcctccagcgccacag
tgcaggtttgatccagccagtatagaactagctctatag
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