Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450832
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Entry
135450832 CDS
T09958
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135450832 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135450832 (RAD54L)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
135450832 (RAD54L)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
135450832
NCBI-ProteinID:
XP_064575445
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Position
8:22020651..22038934
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AA seq
745 aa
AA seq
DB search
MRRSLAPSQLAKRKAGDEDEEEEEEDWRPPTGRKRQKAAAEAETGECYRSPFRKPLAPLT
NRPHCLDSSQHEAFIRSILSKPFKVPIPNYKGPLGLRSLGVKRAGVRGPLHDPFEEGALV
LYEPPVLSAHDQLKIDKDKAPVHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRIPGSHGC
IMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAVVVSPSSLVRNWYNEVEKWLGGRIQ
PLAIDGGSKEEIDRKLAGFMNQHGRRVPSPILIISYETFRLHAEVLQKGTVGLVICDEGH
RLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFEM
PILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL
QTELYKNFLKQAKPVEELKEGKISVSSLSSITSLKKLCNHPALIYDKCVEEEEGFIGALG
LFPSGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRSRRYL
YVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN
DEQAMARVWRDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLG
ELKELFALNETTTSDTHDKIKCRRCVNGHQVRPPPAGSDCTSDLSQWQHCADRRGLQDPV
LRAAWEAAVTFTFHHHSHEEQRGIP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcctggcccccagccagctggccaagaggaaggcgggcgatgaagatgag
gaagaagaggaggaggactggcggcccccgacgggccggaagaggcagaaggcagctgct
gaggcagagactggggagtgttaccgctcgcctttccgcaaacccttggccccgctgacc
aacagaccccactgcctggacagcagccagcacgaggcttttatccgcagtattttgtcc
aaacccttcaaagtccccattccaaattataaagggcccctgggcttgcgctcgctggga
gtcaaacgggcaggagtgaggggtcctctccatgacccatttgaggagggagctctggtt
ctgtacgagccccccgtgctgagtgcccatgaccagctgaaaatagacaaggacaaggca
cctgtccatgtcgtggtggatcctgtcctcagccgtgttttacgaccccatcagagagag
ggggtgaaattcctctgggactgtgtgacgagccggcggatccctgggagccatggctgc
atcatggcagacgaaatggggctgggcaaaactctgcagtgcatcacactcatgtggacg
ctgctccggcaaagcccagactgcaagcccgaaatcgagaaagccgtggtggtgtctccc
tccagcctggtgagaaactggtacaatgaagtagagaaatggctggggggaaggatccag
ccactggccattgatggaggctccaaagaagagattgaccgtaaactagctggctttatg
aaccagcatggccggcgagtgccctcacccatcctgataatctcctacgagaccttccga
ctgcacgccgaggtgctgcagaagggcactgtggggctggtcatctgtgatgagggccat
agactgaagaactctgaaaaccaaacctaccaggctctcaacagcttaaacacacctcga
cgagtccttatctcaggcactcctattcagaatgacctgctggagtatttcagcctggtg
cactttgtcaattcaggcatcctgggaactgcacaggaatttaaaagacattttgaaatg
cccatcttgaaaggaagagatgcagatgcaagtgaagctgagcgacacaagggagaagag
aggcttaaagagctaatcagtattgtgaacaggtgtttgattcggagaacttcagacatc
ctgtccaaatacctgccagtgaagattgaacaggtggtctgctgcagactgacacctctg
cagactgagctgtacaagaacttcctgaagcaagccaagccagtggaggagctgaaggag
ggcaaaatcagtgtttcatctctgtcttccatcacgtccttgaagaagctctgtaatcat
cctgctcttatctatgataagtgtgtagaagaggaagaaggatttattggagccctgggc
ttgttcccttctggctacagcaccaaatctgtggagccccagctttcaggaaagatgctg
gttttggattacatccttgctgttaccaaaagcaccagtaatgacaaggtggttttagtg
tctaactacactcagacactggatctatttgaaaagctctgccggagtagaaggtatctg
tacgtgaggctggacggcaccatgtccattaaaaagagagcgaagatcgtggagcggttc
aacagcccctcgagccctgagttcatcttcatgttgagcagcaaagcaggtggctgcggt
ttgaacctgatcggggccaacaggctggtgatgtttgaccccgactggaacccggccaac
gacgagcaggccatggctcgggtgtggagggacggccagaagaagatgtgctacatctac
cgactgctctcgacagggaccatagaggagaagatattccagcgccagacccacaagaag
gccctgagcagctgtgtggtggatgaagagcaggatgtagaaaggcatttctcccttggg
gagctgaaggagctcttcgcactgaatgagaccaccaccagtgacacccatgacaagatc
aagtgtcggcgctgtgtgaacgggcaccaggtgcggccccctcccgccggctccgactgc
acgtcggacctgtcgcagtggcagcactgcgcggacaggcgcggcctgcaggaccccgtg
ctgagggcggcctgggaagctgctgtcaccttcaccttccatcaccactcccacgaggag
cagcgagggattccctga
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