Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450880
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Entry
135450880 CDS
T09958
Symbol
ABCA4
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135450880 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zle02000
]
135450880 (ABCA4)
Transporters [BR:
zle02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135450880 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
135450880
NCBI-ProteinID:
XP_064575559
LinkDB
All DBs
Position
8:13880032..13940668
Genome browser
AA seq
2322 aa
AA seq
DB search
MNFFRQVRLLLWKNWILRKRQKLRFLVELLWPLSLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGEAPGVVSNYKNSILARVYKDAQELLRETPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLPDFVVYQ
LINAQVRPEQFAYGVPSLTLKDIACSEALLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDALYANVDFFKLFRLLPSVLDRNSPGADLKAWGRVLSNVSQAVQKLARKPSVQDLLRVL
QPFVQDGRPESLGTLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSGY
LYDNTTTPFCNALIQNLESNPLTKIAWHAVKPLLMGKILFAPDSPSVREIVKNANFTFEE
LERLRLLTKAWEEVGPQLWHFFQNSLQMNMIRDSLKHPTVRDFLNSQMAAEGFTAEQIIN
FLHSGSSRTREKGMPDFDWRNIFSAVDQVLRLLSQYLECLTLDKFEGYLDETQLTRQALY
LLEENKLWAAVVFSDLEPTASSLPPHVTYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTSTEVSLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFSMMAVSTLLLTALIM
HGQVLHYSNPLLFFLFLLTFTTATIMQCFLLSTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQDRLTANLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMIFDAFLYGVLSWYLDNVFPGDYGLPQPWYFPLLESYWLGSKSPEAEKTATADEKSPE
SEGCVDQKTMEREKNENNSNKSEEPEKTEEKSDGQGKKDGKNKQCKHKREKEPGEQGKPK
TDVQDKDEININAFFEPEPAGLIPGVCIQNLVKIFANRPKPAVDGINITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLVGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEH
ILFYSQLKGRSREEAEQELETMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNSFGSGFYLTLVRKMRTTKMGRATSFCSCGSQCSCSCSSCVHRGEEGSPELELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPEMQKTGDVQENGSALAKTPTENKAAEQAALKTSDTSRMPVG
KPGDQNEGKGSQQYKGFQLVQQQIKALLIKRFHHASRSLKDFLAQVVLPASFVLLSLVLT
VIIPPFGEYPALTLHPWIYGQQFTFFSNERPGNEQMVSLTHAFLNKPGFGIRCMKNQPLL
NYPCNNMPTAWSTPAVHPNLSSLLLSQEWSPENPSPSCKCSTHKKLTMLPECPAGAGGLP
PPQRVQRSTEILQDMTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLH
VSGDQIVNFLSDLGRMMNVTGGPASLAAAKEMPNFLKYMETEDNIKVWFNNKGWHAVVSF
LNVANNAILRANLRTGQDPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPVTYWLTNFMWDILNFVFSLGQLTXEYXGFI
IVFFLFLAGRWAVIPMMYPASSFFSIPSTAYVALSCINLFVGINSSAITFILELFENNPS
LLKFNKTLKNVLLVLPHFCLGRGLIDLAMNQAVTEVYARFGEEHISDPFQWDFVGKNLVA
MALQGVVFFFLNLFMQHRLFSTRWFAETAMSPIINEDEDVAEERKRIMNGGNKTDILQLQ
ELTKIYAGRRKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTDVTSGDAIVAGS
SILTHISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIERVAEWGIQKLGLP
MYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLWDSIVGVLRDGR
AVVLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGDGYIVTLKIKAPKSGLPPD
PAPAEKFIRMNFPGSFQREKHYNMLQYQICSSSLAKIFRLIISNKENLHIEEYSVSQTTL
DQVFVNFAKQQMEDEEIPLHPRAAGASREARVSPALHQQAVA
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcttcaggcaagtcagacttctcctctggaagaactggatccttcggaaaaga
caaaagcttcgttttctagtggagcttttatggcctctgtcgttgtttcttgcacttgtc
tggctgagaaaagcaaatccactgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggaacactgccatggttacatggcatcttctgcaacatgaacaatccc
tgtttccgcagcccaacccatggagaggctccaggtgtagtgtccaactacaaaaattcc
atccttgcaagggtatataaagatgctcaggagcttttacgggaaacccctgaaatccat
gaccttggaagaatctgggaagagttgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattcttgacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcccagattttgttgtttaccag
cttattaatgctcaagtgcgccctgaacagttcgcctatggtgtccctagcttgactctg
aaggacattgcttgcagtgaggccctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtacacaaggccatgtgtgccctgtcccaggacagtctacaaagagta
gaagatgccttgtatgcaaatgttgatttctttaagctattccggctgcttccctctgtg
ttggacagaaactcaccaggtgctgacctgaaggcttgggggagggtgctgtctaatgtc
tcccaggcagtgcaaaagctggccaggaagccaagtgttcaggaccttttgagggttctg
caaccatttgtacaagatggaaggccagaatccttgggcaccttggtgagttccctgtca
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatctggttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggcatgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacgggaaattgtaaaaaatgcaaacttcacttttgaggag
cttgaacgcctccggttgttgaccaaagcttgggaggaagtaggacctcagctgtggcac
ttctttcaaaacagcctgcaaatgaacatgatccgtgactctctgaagcaccctacagtg
agggacttcctgaacagccagatggctgcagaaggattcactgcagagcaaatcatcaac
tttctgcacagtggatcttcaaggactcgggagaagggaatgccggactttgactggcgg
aacatcttcagtgctgtagaccaagttctgcgtttgctcagtcagtatttggagtgtttg
accttggataaatttgaaggttatcttgatgaaactcagctgactcgtcaagccctttat
ctgctggaggaaaacaaattatgggctgctgtggttttctcagacttagaacctacagcc
agcagtctcccaccacatgtgacgtacaagatccgaatggacatagacgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgttgatgat
ttacgttatatctggggaggttttgcatatctccaggacatgattgagcatgggattata
aagacccagaccagcactgaagtgtcattgggaatttatctgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgccttccccatcttcatggtg
ctggcttggatttattcagtctccatgactgtgaagagcatagtgctggagaaggaaatg
cgtctgaaagaggccatgaagaacaggggcataaccaacggcgtgatttggtgcacttgg
ttcctagacagcttttccatgatggctgtgagcacattgctcctcacagctctgattatg
catggacaagtgctacattatagcaatccacttctgttctttctgttcctactgacattc
accacagccaccataatgcagtgtttcttgctcagcaccttcttctccaaagcaaatctg
gctgctgcctgcagtggagtcatctacttcaccttgtacctgccccacatcgtctgcttt
gtctggcaggatcgtctgactgctaatctgaagatcctagcaagtttgctttctcaagta
gcttttgggttcggtacagaatacttgtcacgctatgaagaacaaggtcttggcctccag
tggggtaacatcagaaccagtcccttggaaggagatgaatatagttttctgttttccatt
aacatgatgatttttgatgctttcctttatggagtactgtcttggtatctcgataacgtt
tttccaggggactatgggctaccacagccctggtatttccctctgctggaatcctattgg
cttggctccaaaagcccagaagctgagaaaacagcaactgctgatgaaaaaagtccagag
tcagaaggttgtgtggatcagaagaccatggaaagggaaaaaaatgaaaacaactcaaat
aaatctgaagaacctgaaaaaacagaagaaaagagcgacggccaggggaagaaggatggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacccggcgagcaggggaagcctaag
acagatgtccaggacaaagatgaaattaatataaatgccttctttgagcccgagccagca
ggattgattccaggagtgtgcattcagaatctggtgaagatttttgcaaacaggcccaaa
ccagcagtagatgggataaatattactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaactaccatgtcgatactgacaggtctcttccctcccacg
tctggaactgtgctggttggtggcctggacatccagactcacatggactccattcggcac
agattagggatgtgccctcagcacaacatcctattcaaccaccttactgtagcagagcac
atcttgttttattctcaactaaaaggaagatccagggaagaagctgagcaagaactagaa
acaatgctggaagacatgggcctcacccataaaagaaatgaagaagctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagtggta
gtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgggatctt
ctgctgaaatatcgcccaggcagaactattatcctgtcaacccatcatatggatgaggca
gacatccttggagacagagtagcaatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactcttttggctctggcttttatctcacccttgttcgcaaaatg
agaaccacaaaaatgggaagggctacatcattttgtagctgtggatctcagtgctcctgc
tcctgttccagctgtgtgcacaggggtgaagaaggatctccagagctggaactggatgga
gatctaaatgagctagcagaagtaatccaccatcatatcccagaagcaaaattaattgaa
agcattggtcaggagctcatttatcttttgcccaataaaaattttaaacaacgatcttat
gccagtctcttcagagaactagaagaaacattggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgaa
atgcaaaaaacaggagatgttcaagaaaatggttctgctcttgccaaaactcctactgag
aacaaagcagctgaacaagcagccctgaaaaccagtgacacctctcgaatgccagtaggc
aaaccaggagatcaaaatgaaggcaaggggtcccaacagtataaaggctttcagcttgta
cagcagcagatcaaagcactgctcatcaaacgcttccaccacgcctcccgcagcctcaag
gacttcctagcacaggttgttctccctgctagttttgtgttgctgtctctagtacttaca
gtcattattcctccatttggagaatatcctgccttaacattacacccttggatctatgga
caacagtttactttcttcagcaatgaacgtcctggcaatgagcagatggtctcccttact
catgctttcttgaataaaccaggatttggaattcgctgtatgaagaatcagcctcttttg
aactacccatgcaataacatgccaactgcctggagcacacctgctgtccatcctaaccta
agcagcctcctgctgagccaagagtggagccccgaaaatccgtcaccttcctgcaagtgc
agcactcacaagaaactcactatgctgccagaatgccctgcaggtgcaggaggcctccca
ccaccacagagagtgcaacgcagcacagaaattcttcaagatatgacccacagaaatatt
tcagattttctagtgaaaacatatcccactttgataaaaggaagcttgaagagtaaatac
tgggtcaatgagcagagatatggaggaatctctataggaggaaggcttccagtccttcat
gtttctggagatcaaattgtcaattttttaagcgatcttggccgaatgatgaatgtgaca
ggaggaccagcttcactggctgctgctaaagaaatgcctaatttccttaaatacatggaa
acagaagataatattaaggtgtggtttaacaataaaggctggcatgctgtggttagtttc
ctcaatgtagccaataatgcaatcctcagagctaacctgaggactggccaagaccctgag
gaacatgggatcactgctataaaccatcctctgaacctcaccaaggagcaactctctgaa
gtcactgtactgaccacttcagtggatgctgttgttgccatctgtgtgatttttgccatg
tcctttataccagccagttttgttttatacctgatccaagaacgtgtaacaaaagccaaa
catctccagtttgtcagtggtgtgagccctgttacctactggctaactaacttcatgtgg
gacatacttaactttgtgttttctttaggccaactgacatgagaatactgaggatttatc
atagttttttttctgtttcttgctggcagatgggcagtaattcccatgatgtaccctgct
tcttctttcttcagtatccccagcactgcttatgttgcattgtcttgcattaatctcttt
gtgggaatcaacagcagtgccattacatttatcctggaattatttgaaaataatccatcc
ttgctgaagtttaataaaacattgaaaaatgtactgcttgtcctcccacatttttgtttg
ggccgtggactcatagacttggccatgaaccaagctgtgactgaagtatatgcaaggttt
ggtgaggagcatatttctgatccctttcagtgggactttgttggaaagaacctggttgcc
atggctcttcaaggagttgtgttcttctttctgaatctctttatgcagcaccgtttgttc
tccacaagatggtttgctgagactgccatgtcacctattattaatgaagatgaggatgtt
gcagaagaaagaaaaagaattatgaatggaggaaacaaaacagatatcttacaattacaa
gaactgaccaagatttatgcaggtcgacgcaagcctgcagtggacagactctgtgttggc
atccgtcccggagagtgctttggccttttgggagtgaatggtgctggcaaaacaacaaca
ttcaaaatgctgactggagatactgatgtgacatctggagatgctatagtggctggcagt
agtatattgacccacatttctgatgtccatcaaaacatgggatactgccctcagtttgat
gccattgatgacctgctcacaggacgagaacacctgtatttatatgcacgcttgcggggg
gttccagcagaagaaatcgagagggttgctgaatggggcatccagaagctgggactccct
atgtacgcagaccacctggcagggacctacagtggtggcaacaagcgcaagctctccact
gccattgccctgataggctgcccaccactcgtcttgctagatgaaccgaccacggggatg
gaccctcagtcccggcgcctcctgtgggactctattgttggtgtgctcagagatgggcga
gcagtggtgctaacctcacacagtatggaagaatgtgaagccctctgtactcgtttagcc
atcatggtacaaggtaccttcaaatgcctaggcacaattcaggagctaaaatacaagttt
ggagatggctacattgtcactctgaaaatcaaagctccaaagtctgggctgcctccagat
cctgctcctgctgagaaattcatacgcatgaacttcccagggagtttccagagagaaaaa
cactacaacatgctgcagtatcagatttgctcttcctctctggctaagatttttcgatta
ataatctccaataaggaaaatttgcatattgaagaatattctgtgtctcaaacaacatta
gatcaggtttttgtgaactttgctaaacagcagatggaggatgaggaaattcctttgcat
ccacgtgcagctggagccagccgagaagccagggtgtccccagctctgcatcagcaggca
gttgcatag
DBGET
integrated database retrieval system
