KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450941
Entry
135450941         CDS       T09958                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zle03036]
    135450941 (KDM4A)
Enzymes [BR:zle01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     135450941 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     135450941 (KDM4A)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135450941 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 135450941
NCBI-ProteinID: XP_064575710
LinkDB
Position
8:20301865..20328313
AA seq 1054 aa
MASELESLNPGQRIMTFRPTMEEFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRQCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKSGKQCAEEMETEEMCKEEVDGDETKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSTQYEADMAEPCERPTSEFVQQGEQRIKLPDRVDSAKFEELKPVKLEEEEQEAAALDL
SISHASNSTSVLPASKQSAASSVQSSSPCYSSDSESCDALAKRTVPGPAGVFTVHSYAKG
DASGSDSEHTSGRKATASSSVTEQELTEVGKEYLSSMKESKKSKGRRQPLSKLPRHHPLL
VKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRSMAQQPPYCAV
CMLFQAYQAECEGSSQNSGVTPAAADGKIRTKPLIPEMCFTATGCSTDLNLSTPYLEEDG
TSVLITCKNCHVCVHASCYGVSPEKATEDWMCSRCTENALEEDCCLCSLRGGALQRANDD
KWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQCSHGR
CPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIVISKHK
NGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRWTDG
QVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRFTEIF
EEKEVSQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagagcctcaacccggggcagcgcatcatgaccttccgccccacc
atggaggagttccgcgacttcagccgctacatcgcctacgtggagtcgcagggcgcccac
cgcgccggcctggccaagatcgtgccgcctaaggagtggaagccgcggcagtgctacgat
gacatcgacgagctcgtcatccccgcgcccatccagcaggtggtgacggggcagtccggg
ctcttcacgcagtacaacatccagaagaaggccatgacggtccgcgagttccgcaggatc
gccaacagtgacaagtactgcacaccccggtacacagactttgaagaccttgaacgaaaa
tactggaagaatcttacgttcaatgcccccatctacggggctgacgttaatggcacgctc
tacgacaagcatgtagatgcgtggaatattggcagattgaacacaatcctggatattgtg
gagaatgaaagtggcataaccattgaaggagtgaatactccttacctgtattttggcatg
tggaaaacttcctttgcttggcacaccgaggacatggatctctacagtattaattacttg
cattttggggaacccaagtcatggtactccatccctccagagcatgggaaaaggctggag
agacttgcaaaaggttttttcccaggaagtgcccagagctgtgaagcatttctccgtcac
aagatgactctcatctctccatcaattctgaagaaatatggaattccatttgataaggtg
acacaggaggctggagagttcatgataacctttccttatagttatcatgctggcttcaac
cacggctttaactgtgctgaatctaccaactttgctactcttcggtggattgagtacggg
aagcagtcggtgctgtgctcctgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccagatcgttacaagctttggaaagctgggaaggacgtgactgtc
attgaccatgctcttccaaccccagaggcagcagagttccttaaaggggatctcatgcaa
aaagtcaagagtgggaaacagtgtgctgaggagatggaaacagaagagatgtgtaaagag
gaggtagatggggatgagaccaaaagcatccccaagcaccgcataggaacaaaaaggcac
agggtctgcctggaagtgcctcaggaggtgagtgagagtgaggccttccctaaggaggag
ctgagctccacacagtatgaagcagacatggcagagccttgtgagaggcccacgagtgaa
tttgtgcagcaaggcgaacaaaggatcaaacttccagatcgtgtggactcagccaaattt
gaagaattgaaaccggtgaagcttgaggaagaagaacaagaagcagctgcactggatctc
tccatttcacatgcttcaaattccacttcagtgttgccagcttcaaagcagagtgctgca
tccagtgttcagtctagctcaccttgctactcctcagactcggaatcgtgtgatgcgttg
gcgaagcgaacggttccggggccagccggggtgttcaccgtgcacagctacgccaagggc
gatgccagcggctccgacagcgaacacacttcagggaggaaagccactgccagctccagt
gtcactgagcaggaactgacagaggtgggaaaggagtatttaagctccatgaaggagagt
aagaagtccaagggccgtcgccagccattgagcaaactcccccgtcatcacccactcctg
gtcaaagactgcatcagtgatgatgaggcatcagagcagctaactcctgaagaagaggct
gaggagacagaagcatgggccaagccactgagccagctgtggcagaatcggccgccaaac
tttgaggctgagaaagaatacaatcgcagcatggcgcagcagcccccgtactgtgctgtc
tgtatgctcttccaggcatatcaggcagaatgtgaaggcagcagtcaaaactctggagta
actccagctgctgcagatgggaagatccgaactaaacccctgattcctgaaatgtgcttt
actgcaactggctgcagcactgacctcaatctttcaactccctacctggaggaagatgga
accagcgtactcatcacctgcaagaactgccacgtctgtgttcatgccagttgttatggt
gtgtcccctgagaaggccactgaagactggatgtgctcccggtgtacagaaaatgcgtta
gaagaggactgctgtttgtgttccttacgaggaggagcgctgcagagagccaatgatgac
aagtgggttcacgtgatgtgtgctgtggctgtactggaggcaaaatttgtgaacattgca
gagcggagtcctgtagatgttggcaaaatccccctgcagcgtttcagactgaaatgcatc
ttctgcaagaaaaggagaaagagaattgcaggttgctgtgtacagtgttcacatggtcgg
tgtcccacatcctttcatgtcagctgtgcccaagcagcaggagtcatgatgcagcctgat
gactggccatttgttgtcttcattacctgcttcaggcataagactccatctcaggctgag
cgagctaaggctgcactccaggatctgtcccctggacagatcgtcatcagcaagcacaag
aatggtcgcttctatcagtgtgaagtggtcagccttgcaaaggagactttctacgaggtc
aactttgatgatggctccttcagtgataacctgtacccagaggacattgtgagtcgagat
tgtcttcagttaggtccccctgctgaaggggaagttgtgcaggtgagatggacagacgga
caagtttatggagccaagtttgtcgcatcacacgctatccagatgtatcaggtggaattt
gaagatggttcacaactgatggtgaaaagggatgatgtatacactcttgaagaggagctt
cctaagagagtgaagtcaaggctgtcaattgcttcagatatgcgcttcacagagatcttc
gaagagaaggaggtcagtcaagagaggaagagacaaagagtgatcaattcacgctaccgt
gaagattatattgaacctgccttgtaccgggccatcatggagtaa

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