Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450976
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Entry
135450976 CDS
T09958
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zle03032
]
135450976 (PIF1)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135450976 (PIF1)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135450976 (PIF1)
DNA replication proteins [BR:
zle03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135450976 (PIF1)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
135450976 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
Herpes_Helicase
AAA_16
Mg_chelatase
ABC_tran
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
135450976
NCBI-ProteinID:
XP_064575780
LinkDB
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Position
8:complement(19690383..19698335)
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AA seq
603 aa
AA seq
DB search
MEAAELRCTAAVEQPLPGGLAPRRRLMRNATVLLGRNELRQPVLRVAGGSGAAAAVLSFV
LAGDAVRLFTRFAGEGRAAVRVGPDGAQVLLSDCPPDALRRFLRLLRLKVSAGPRDAPRR
PRLLERPPPSFSVISPVQERDLLGGHGRGQERGQRPAEVPRAERRPPARLSAEQEAVLGA
VRSGKSIFFTGSAGTGKSFLLKRILGSLPPNITYATASTGVAACHIGGTTLHAFAGIGSG
KAPLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDEPFGGIQ
LIICGDFLQLPPVRKANEETKFCFQAKSWRKCIHINMELTEVRRQTDKTFVSILSAIRLG
RCTEEVTRQLMQTAAHKSERDGILATRLCTHKDDVEITNERRLQQLPGEVHVFEALDSDP
MLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQRGLPKVRFL
CGVTQLIKMEKWVIKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQ
AYVALSRARSLAGLRVLDFDPKAVRADPAVLHFYRHLRHHQLPAQHSLHTYSDTDEKENW
KYN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggagctgcgctgcacggcggccgtggagcagccgctgccggggggcctc
gccccgcgccgccgcctgatgcggaacgcgaccgtgctgctgggccgcaacgagctgcgc
cagcccgtgctgcgcgtggccggcggcagcggcgcggcggcggccgtgctgagcttcgtg
ctggccggggacgccgtgaggctcttcacgcggttcgcgggcgaggggcgggcggcggtg
cgggtggggccggacggcgcccaggtgctgctgtccgactgccccccggacgcgctgcgc
cgcttcctccgcctcctgcgcctcaaggtgtccgccgggccgcgggacgcgccgcgccgc
ccccgcctgctggagcggccgccgccgtccttctccgtgatcagcccggtgcaggagcgg
gacctgctgggcggccacggccgcggccaagagcgggggcagcgcccggcggaggtgccc
cgcgcggagaggcggcccccggcgaggctctcggcggagcaggaggcggtgctgggcgcc
gtgcggagcggcaagagcatcttcttcaccggctctgcagggactgggaaatcgttcctg
ctgaagaggatcttgggctccctccctcccaacatcacctacgctacagccagcacggga
gtggcggcttgtcacatcggtggcactactctacacgcctttgcagggatcggctctggg
aaggcaccgctggaacagtgcattcagctggcagagaggccaggggtgcgccagcactgg
ctggcctgccagcacttaattattgatgagatctcaatggtggatggcaagttctttgac
aagctggaagcagtagcaagggccgtcagaaaacgggatgagccttttggaggaattcag
ctaattatctgtggggatttcttacagctacccccagtccgcaaggcaaatgaagaaacc
aagttctgcttccaggcaaaaagttggaggaaatgcatccacataaacatggagctgact
gaagtgcggagacagactgacaagacctttgtctcaatcctgagtgcaatccgtttaggc
aggtgcacagaggaggttaccagacagctgatgcagacagctgctcacaagtctgagcgt
gatggaatcctggctacgaggctgtgcacccataaagatgatgtagaaataaccaatgag
agacgcttgcaacagctcccaggagaagtgcatgtgtttgaggctttggacagtgaccca
atgctggtgaagttaattgatgctcagtgtcctgtgggtggtagagttgagctaaagctt
ggagctcaggtgatgttagcaaagaaccttgatgtgtctcaagggctggtgaatggggca
cgaggtgttgttgtagggtttgaaagtgaacagagggggctgcctaaggtgaggtttctc
tgtggggtcacacagctcataaagatggagaaatgggtcatcaaaggaccatcaggagtt
catctgagtcgtcagcaattacctttaaaattggcatgggccatttccattcacaagagt
cagggcatgtctctggactgtgtggagatctccctgtcccgtgtctttgagagcggccag
gcctacgtggccctgtcccgcgcccggagcctcgcggggctccgagtcctggatttcgac
cccaaagcagtgagagctgaccctgctgtgctgcacttctacaggcacctgaggcaccac
cagcttccagcccagcattcattacacacctattcagatactgatgagaaggagaactgg
aaatacaactga
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