Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451010
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Entry
135451010 CDS
T09958
Symbol
LRRC8C
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135451010 (LRRC8C)
Ion channels [BR:
zle04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
135451010 (LRRC8C)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
135451010
NCBI-ProteinID:
XP_064575850
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Position
8:complement(15298508..15322172)
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AA seq
802 aa
AA seq
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MIPVTEFRQFSEQQPAFRVLKPWWDVFTDYLSVAMLMIGVFGCTLQVMQDKIICLPKRVQ
PCQNQSNSSNVLSTMPDTTPLPPPRPSTPPATVEMKGLKTDLDLQQYSFINQVCYERALH
WYAKYFPYLVLIHTLVFMLCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGE
DSEEKDNRKNNINKSNTTQPSTEGTLVKTQSLKSIPEKLVVDKGSPGALDKKEGEQAKAL
FEKVKKFRLHVEEGDILYVMYVRQTVLKVIKFLIIIAYNTALVSEVNFTVVCNVDIEDMT
GYKNFCCNHTMAHLFSKLSYCYLCFVSIYGLTCLYTLYWLFYRSLKEYSFEYVRQETGID
DIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNNEWTADKLRQRLQTN
SHSHLELQLFMLSGLPDTVFEITELQSLKLEIINNVMIPATIAQLDNLQELSLHQCSVKI
HSAALAFLKENLKILSVKFDDIRELPHWMYGLRNLEELYLIGSLSHDISKNITLESFREL
KSLKVLHIKSNLSKIPQSAVDVSSHLQKLCIHNDGTKLVMLNNLKKMVNLTQLELVHCDL
ERIPHAVFSLLSLQELDLKENNLKSIEEIVSFQHLRKLTILKLWYNSITYIPEHIKKLTS
LERLSFSHNKIEVLPSHLFLCNKIRYLDLSYNDIRFIPPEIGVLQSLQYFSITCNKVESV
PDELYFCKKLKTLKIGKNNLSVLSPKIGNLTLLSYLDIKGNHFEILPPELGECRALKRTG
FTVEDNLFETLPSDVREQMKAE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgtgaccgagttccggcagttctcggagcagcagccggcgttccgcgtgctg
aagccctggtgggatgtgttcaccgactacctctcggtggccatgctgatgatcggcgtc
ttcggctgcaccttgcaggtcatgcaagacaagataatatgccttccaaagcgcgtccag
ccttgccagaaccaatctaatagttcaaatgtgcttagcacaatgccagacaccaccccc
cttcccccaccgaggccatccacccctccagctacagttgaaatgaagggactcaagact
gacttggaccttcagcaatacagctttataaatcaggtgtgctatgaacgggctctgcac
tggtatgccaagtacttcccttaccttgtccttatacacacactggtattcatgctgtgt
agtaacttctggttcaaattccctggatcaagctccaaaattgaacacttcatttcaata
cttgggaaatgttttgattccccctggacaacaagagctttatctgaagtgtcaggggaa
gactctgaagagaaggataacaggaagaacaacattaacaagtctaatactactcagcca
agcactgaaggcactttggtcaagacacagtctctaaaatcaatccctgagaagttagtt
gtggataagggatcacctggggcattagataaaaaagaaggtgaacaggccaaagcactg
tttgaaaaggtgaagaaatttcgactgcatgttgaggagggtgatatactctatgtcatg
tacgttcgccagactgtacttaaggtaattaaattccttattattattgcttacaacaca
gcacttgtctcagaagttaattttacagttgtctgtaatgttgatattgaagacatgaca
ggatacaagaacttttgctgtaatcacacgatggcacatctgttctctaaactttcttac
tgctacctgtgctttgtaagcatctatggcctgacatgcctttatacactgtactggttg
ttctaccgttccctgaaggaatattcgtttgagtacgtccggcaggagacgggaatcgat
gacatcccagatgtcaagaacgactttgccttcatgcttcatatgatcgatcagtacgat
cctctctactccaagcgctttgctgtcttcctgtccgaagtcagtgaaaataagctgaag
cagctgaacctaaacaatgagtggactgcagataaactgcgacagaggctgcagacaaac
tcccacagccatttggagctacagcttttcatgctttccggactaccagacacagtgttt
gaaattactgagctgcagtctttaaaacttgaaataattaataatgtaatgataccagca
accattgcacagttggacaatctccaggagctctcattgcaccagtgctctgtgaagatc
cacagtgctgccttggcttttctgaaggagaatctcaagatcttgagcgtcaagtttgat
gacatcagagaacttccacattggatgtatggcctcagaaatttggaagaactctattta
attggctccctaagtcatgatatttctaaaaacattacactggagtcttttcgggaactt
aaaagcctaaaagttctacacataaaaagtaatttgtccaaaatcccacaatctgcagtt
gatgtttcaagtcacctgcagaaattgtgtatccataatgatggcactaagttagtgatg
ctcaacaacctgaagaaaatggtcaacctgacacagctggaattggttcattgtgattta
gagcgcatacctcatgcagtcttcagccttctcagtcttcaggaattggatctaaaggaa
aacaacctcaaatccattgaagaaatagtaagttttcaacatctgcgaaagctgaccatt
ctaaagctgtggtacaacagtataacctacatcccagagcatataaagaaactcaccagt
ctagagcggctttccttcagccataacaaaatagaggttcttccgtcccacctgttccta
tgcaacaaaatcagatacttggatttgtcttacaatgacattcgctttatcccacctgaa
ataggagttcttcagagtttacagtacttttccattacttgcaacaaagtggagagtgtg
ccagacgaactgtacttttgcaaaaaactgaagactctgaaaattgggaaaaataacttg
tcagtcctttcacctaaaattggtaatttgacattgctctcctacttggatattaaaggc
aatcactttgaaatcctcccgcctgagctcggtgagtgcagagctctgaagaggactggt
ttcactgtagaggacaacttgtttgaaactttgccttctgatgtcagggagcaaatgaaa
gctgaataa
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