Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451200
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Entry
135451200 CDS
T09958
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135451200 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135451200 (GTF2B)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
135451200 (GTF2B)
Prokaryotic type
Archaeal type
TFB
135451200 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
135451200
NCBI-ProteinID:
XP_064576227
LinkDB
All DBs
Position
8:15391907..15414160
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AA seq
323 aa
AA seq
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MSCVRSSSSATARLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWR
TFSNDKATKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRA
MMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGV
PRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAAT
HIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIY
PRAPDLFPADFKFDTPVDKLPQL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtgcggagctcctcgtcagccacagctcgtttggatgtgcttccgagggtt
acttgcccaaatcatccagattccattttagtggaggattacagagctggtgatatgatt
tgttctgagtgtgggctagtagtaggtgaccgggtcatagacgtgggctccgagtggaga
acgttcagcaatgacaaagccaccaaagacccatctcgagttggggacacccagaatcct
ttgctcagtgatggtgacttgagtacaatgattggcaagggcacaggtgcagcaagtttt
gatgaatttgggaattcaaagtaccaaaatcgcagaactatgagcagctctgatcgtgcg
atgatgaatgcttttaaagaaattacgaacatggcagacagaatcaacctccctagaaat
atagttgatcgaacaaataatttattcaagcaagtgtatgagcaaaagagcctgaagggg
agaagtaatgatgctattgcttccgcttgtctctacatagcctgtaggcaagagggcgtt
ccaagaacatttaaagaaatatgtgcagtgtccaggatttcaaagaaagaaataggccgg
tgttttaaacttattttgaaagctctggaaaccagcgttgatttgattacaactggagac
ttcatgtcacgattctgttctaacctgggtcttcccaaacaagtacaaatggcagccacc
catattgcccggaaagctgtggaattagatttggttcctgggagaagccctatctctgta
gcagctgcagctatttacatggcatcacaggcttcttcagagaaaaggacgcaaaaagaa
attggtgatattgctggtgtggctgatgttacgattagacagtcatacaggctgatctat
cctcgagctccagatcttttcccagcagacttcaagtttgataccccagtagacaaacta
ccacagctgtga
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