KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451433
Entry
135451433         CDS       T09958                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04382  Cornified envelope formation
zle04510  Focal adhesion
zle04512  ECM-receptor interaction
zle04518  Integrin signaling
zle04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:zle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135451433 (COL4A3)
   04518 Integrin signaling
    135451433 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135451433 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135451433 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135451433 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zle04147]
    135451433 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:zle00536]
    135451433 (COL4A3)
Exosome [BR:zle04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135451433 (COL4A3)
Glycosaminoglycan binding proteins [BR:zle00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135451433 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135451433
NCBI-ProteinID: XP_064576669
LinkDB
Position
9:9829677..9884252
AA seq 1670 aa
MAGGGCPGRLAPVLLLALLWPGRAAAENCVCKGKSPCFCDSTKGNKGEKGFPGVPGPPGQ
RGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGVPGIPGFSGPPGLPGEPGTVGPPGLPGV
PGCNGSKGDQGFPGPPGRRGAPGLPGVAGIKGEKGYPAEGYSQEYGAKGDPGLPGMPGLQ
GAQGAQGYPGELGPQGPPGPLGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPG
TVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGKEG
APGPPGLPGQKGEQGKPGLAGRQGAKGMKGNPGPPGACGRTEYYDYVVGEKGDEGPPGPP
GPKGQRGMPGPQGPPGAAGRPGVSRPGMRGPPGFPGPKGTKGERGQTGLCIVGPPGLPGI
TGRPGSVGLPGPPGEPGRVTFGTGLPGLPGEPGCTGPPGPPGDTGMRGDDARVCTDCSYI
PGMPGLPGSAGPRGQDGMPGREGATGPKGSPGSPGTPGLPGTQGPPGFRGDQGRKGSKGE
PRYVHPEGPKGEQGDPGARGEKGRRGSSGFLGRPGSKGSKGSKGEEGLAGSKGDRGLPGL
PGGIGLPGEMGLPGLAGYGPQGVRGFKGSKGIPGPPGLPGEAGLKGETSRATPLPALPGP
QGPHGLPGPPGVPGRVGARGQPGDPGHSGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGPP
GCEGKIGDPGRAGNLGQPGQKGEPGMIIPGEPGRMGSPGGLGSPGSKGEVGLPGLPGLPG
HPGHDGDDGLRGDRGSPGAPGDPGFPGKPAECLIGLPGLPGGQGAAGPPGGRGLQGPKGN
LGAPGLSIPGTYGRPGEPGLIGLQGKAGLPGPKGQSGRPGISGLPGVRGDPGVMGLLGIP
GPPGMVGRPGNPGIQGSPGFPGIKGRKGFLGEKGEPGDKGFPGPSETLVGIGDKGERGLK
GVQGQMGVRGEKGDVGVQGPPGVDGSEGMPGLPGAKGFMGLPGIPGGQGFPGAPGDQGDM
GIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDPGPPGVFG
SKGEKGSEGQPGLTGVPGPHGIRGEAGGAGIPGQCGPPGNPGVKGCQGRPGQQGVPGPPG
GVGAPGKPGLVGERGTQGQDGMPGPPGVKGEPGPPGRGIPGFPGIPGRRGIKGDMGLPGF
PGPPGVKGHQGDQGPIGPPGLVGLPGFQGTTGMAIIGQKGNRGIPGAHGRPGAPGFPGLP
GLSTLSVKGSKGVRGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGDPGFLGFPGVKG
EKGNQGPPGPQGAEGPRGPKGQQGPPGFPGKIFSIPGSKGPAGLPGVPGTPGDQGIPGIP
GLQGPKGVKGLPGRFGHPGHPGLPGPKGDRGFPGPRGQPGLIGFPGLQGLPGSPGTITAG
PTRKGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFSTM
PFLFCSPNDVCSFASRNDYSYWLSTAVVMPPDMAPISGRALEPQISRCVVCEGAAMVIAV
HSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAVPFIECHGRG
TCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGQLENIISRCQVCMKRPI
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggtaataagggtgaaaaaggctttcctggtgttccaggcccacctggtcaa
agaggctttcctggtccggaagggcctccagggccacagggaccaaagggctctccaggg
cttacaggcttagttggacccaaaggtatccgaggagtcccaggaatacctggattttca
ggtcctccaggccttccaggtgaaccaggaactgttggtcctcctgggctcccaggtgtt
ccaggatgcaatggctcaaagggtgaccagggatttccaggtcctccaggtcgaagaggt
gctccaggccttcccggagttgctggtatcaaaggagagaaggggtaccctgcagaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccaggaatgcctggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggacct
ttaggcatgccaggaaaaccaggacctcctggacctaagggtcttatgggactgaaagta
ataggcgccaaaggaaggaagggtgacactgggttaactggaccccctgggcccccagga
actgttattgtgacattgtctggaccagacaacatgacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggactcccagggccaatggggtttacagggccagttggtgattcc
caaagtgaaaagggtgaccgaggagaaccaggagcacaggggaagcctggaaaagaaggt
gctccaggtccacctggcttaccgggacaaaagggtgaacagggcaagccaggactggct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccacctggagcttgtggtcga
acggagtattacgattatgtggttggtgaaaagggggatgagggaccccctggacctcca
ggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggagctgctggtaga
ccaggtgtgtcaagacctggtatgagaggtcctccaggatttcctgggccaaaaggaaca
aaaggagagagaggacaaactggcttgtgtattgtaggccctccaggactgcctggtatt
actggcaggcctggttctgttggattgccaggtcctccaggagagccaggtagagtaaca
tttggaactggcctgccaggactccctggagaaccagggtgtacaggacctccaggacct
ccaggagatactggcatgagaggtgatgatgctcgtgtgtgtactgattgtagctacatt
ccgggaatgcctggtctgcctggttctgctgggcctcgtggtcaggatggcatgcctggt
agagaaggagcaacaggtccaaaaggttctccaggttctccaggaacaccagggcttcca
gggactcaaggacctccaggtttcagaggagatcaaggccgtaaaggatctaaaggtgaa
ccaagatatgtacatccagaagggccaaaaggtgagcaaggagatccaggagccagggga
gaaaaaggaagaagaggttcaagtggatttctgggaagacctggctctaaaggatccaaa
ggttctaaaggtgaagagggattggctggatcaaaaggagatagaggactacctggattg
cctggtggaattgggcttcctggagaaatggggcttcctggactggcaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatacctggaccacctggattacctgga
gaagcaggtctgaaaggagagaccagtagggcaactccattacctgcattgccaggacct
cagggaccacatggtttacccggacccccaggagtgcctggtagggttggagcaagaggt
cagccaggtgatccaggacattcagggccaacaggtgacacaggctttccagggcttggg
tttcctggaaatccaggtccaaaaggagataaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagattggagatccaggccgagctggaaacctaggacaaccaggacaa
aagggtgagccaggcatgattattcctggagagccaggcagaatgggttcaccaggaggt
ctcggcagtcctggctcaaaaggtgaagttggacttccaggactcccaggcctaccaggg
catcctgggcatgatggtgatgatggcctaagaggagatcgtggctcgcctggagctcct
ggagacccgggttttccagggaaacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctgcaggcccaccaggaggaagaggtttacaaggtccaaaaggaaac
ctaggtgctcctggtttgagtatcccaggaacctatggaaggcctggggaacctggatta
ataggtcttcagggaaaagcaggattacctggtcccaagggacaatctggaaggccagga
atctctggtttgccaggtgtaaggggagatccaggtgtaatgggactgttaggaattcct
ggaccccctggcatggttggaagaccaggcaaccctggtatccaaggttctcctggcttc
ccaggaataaagggaagaaaaggatttcttggagaaaaaggtgaaccaggtgataaaggt
tttccaggaccatctgagaccttggttggtattggggacaaaggagaacgaggtttaaaa
ggagttcaaggccaaatgggtgtgagaggagaaaaaggagatgttggtgtgcaaggtcca
ccgggtgttgatgggtctgaaggaatgcctggtctaccaggagccaagggatttatgggt
cttccagggattcctggaggacaaggattcccaggtgcacctggagaccaaggggacatg
ggaattccaggtccaaaaggccagaagggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctccaggagaacctggcccaaagggagatccaggtcctccaggagtttttggc
agcaaaggagaaaagggctctgagggtcaaccagggcttacaggagtaccaggaccacat
gggatcagaggggaagctggaggtgcaggaatcccagggcagtgtggaccccctggaaat
cctggtgttaaaggatgccagggccgcccaggacagcagggagtcccaggccctcctggt
ggtgttggagcccctggaaaacctgggcttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggtcccccaggagtaaaaggagaaccaggacccccagggagagggatccct
ggttttccaggtattcctgggcgtagaggaatcaaaggggacatgggactgcctggtttt
cctgggcctccaggtgtgaaaggtcatcagggagatcaaggacccattggacctcctggc
ttagtggggttacctggatttcaaggcaccacaggcatggcaatcattggccagaaaggg
aacagaggtattcctggtgcacatggaagaccaggtgctcctggttttccaggccttcct
ggtctttccactctcagcgtgaaaggaagcaaaggtgtccgaggggcggatggaattcca
gggccaaggggcccagctggtgacattggccctcctggtcccaaaggaatagaaggtcga
tcaggctatcctggtgctagaggggaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcaaggacccccaggaccacaaggtgcagaagggccaaggggaccaaag
ggccagcaaggcccacctggattccctggaaaaatattctccatcccaggaagcaagggt
cctgcaggactgccaggagtcccaggaacaccaggtgatcaaggaattccagggattcct
ggactacaaggacccaagggagtaaaaggtctaccaggccgttttggtcacccaggacat
ccaggattgcctggtccaaaaggagacaggggatttccaggaccaagaggacagcctgga
ttgattggctttccaggtctgcaggggttacctggatcaccaggtactatcactgctggt
ccaacaagaaaaggatttatctttacccggcatagtcagacaacaaagattccttcgtgc
ccacatgggacatcccagatctatgttggctattcactgctttttgtacaaggaaatgaa
cgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgcagccccaatgatgtttgtagctttgcttctcgcaatgactactcc
tactggctgtccactgcagtggtgatgccaccagacatggcacccatttctggcagggca
ctcgagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagcagtt
cacagccaaacaactgtagttcctgcatgtccagatggctggatgtctctctggaagggt
ttttcttttgttatgtacacaagtgctggctcagaagcttctggccaagcattggcatct
cctggatcttgtctggaagaatttcgggccgtcccattcatagagtgccatggcaggggg
acatgcaactactacacaaattcctacagtttctggttggcatcattaaatccaagaaga
atgttcaggagacctgtgccacaaactttgaaagcaggacaactagagaatatcatcagt
cgttgtcaggtctgcatgaagagaccaatctaa

DBGET integrated database retrieval system