Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451485
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Entry
135451485 CDS
T09958
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135451485 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135451485 (COPB2)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135451485 (COPB2)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135451485 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
135451485
NCBI-ProteinID:
XP_064576807
LinkDB
All DBs
Position
9:complement(3070124..3084127)
Genome browser
AA seq
912 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKNFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLAELRPAREYPLVTPNEERNLLEEAK
GFEPSGIMPSQKAEEPVPSPKQEVMKTVVQNSDNLPARDQKTLLDLEDDLDNLDLEDIDT
TDINLDEEILDE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgcctggacatcaagcggaagctgacggcgcgctctgaccgcgtcaagagc
gtggacctgcaccccacggagccatggatgctggccagcctctacaacggcagtgtctgt
gtctggaaccacgagacacagactctggtgaagaattttgaagtgtgtgacctgcctgtg
agagctgccaagttcgtggcaaggaagaactgggttgtaactggagctgatgacatgcag
atcagagtttttaattacaacaccctggaaagagttcacatgtttgaggctcattccgac
tacatccggtgcattgcagtgcaccccacgcagcccttcatcctcacgagcagtgatgac
atgctgatcaagctctgggactgggataagaagtggtcttgttctcaggtgtttgaagga
cacacccattacgtcatgcagattgtcataaacccaaaagacaacaaccagtttgccagt
gcctctttggataggacaattaaggtgtggcagcttggatcatcctctcccaacttcacc
ttggaaggccatgagaaaggagtgaactgcattgactattacagtggtggggacaagcca
tacctcatttctggggcagatgatcgcctggtgaagatctgggactaccagaataaaact
tgtgtccagacactggaaggccacgctcagaacgtgtcgtgtgtcagcttccatccggag
ctgcccatcatcatcaccggctctgaagatggcacggtgcggatctggcactccagcact
taccgcctggagagcaccctgaactacggcatggagagggtgtggtgtgtggccagcctc
aggggctccaacaacgtggctctgggctatgatgagggcagcatcattgttaagcttggt
cgtgaagaacctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattct
gaagtccagcaggctaacttgaaagcaatgggagatgctgaaatcaaagatggagagagg
ctgcccctggctgtgaaggatatgggcagctgtgaaatctatcctcagacaatccagcac
aaccctaatggacggtttgtggtggtgtgtggtgatggtgaatacatcatctacacagcc
atggctctgaggaacaagagttttggttctgcacaggagtttgtgtgggcacatgactct
tcagagtatgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagag
aagaagtcgttcaagcctgattttggagcagaaggcatctatggtggctttctattggga
gtcagatctgtcaatggcctggcattctatgactgggagaacacagagctgattcgtagg
attgaaatccagcccaaacatattttctggtctgactcgggtgagctcgtgtgcattgct
acagaagagtcattcttcattctcaagtacctgtcagaaaaagtggcagcagcccaagaa
acacatgaaggtgtcactgaagatggaattgaagatgcctttgaggttcttggtgagatc
caggagattgtgaaaacaggtctgtgggttggtgactgctttatttacaccagttctgtg
aacagactcaactactacgttggaggagagattgtcaccattgcccacctggacagaaca
atgtatctcctgggctatatccccaaggacaacaggctgtatttgggtgataaagagctg
aacattgttagctactctctgctggtctcagtgctcgaatatcaaactgctgtcatgagg
agggatttcggcatggctgacaaagttcttcccacaatcccaaaagaacagagaaccagg
gtggcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagat
ccagagcatcgttttgaacttgctcttcaacttggagaattaaaaatagcctatcagctt
gcagtggaagcagagtcagaacagaagtggaagcagcttgcagagcttgccatcagtaaa
tgccagtttggcttagcccaggagtgtctccaccatgcccaggactatggagggctgctg
ctcctggccacagcttcagggaacgccagcatggtgaacaagttggcagaaggtgctgag
aaggatggcaagaataatgtggcatttatgagctacttcctgcagggaaagcttgattca
tgtttggaactgctgatcaaaactgggcgtctccctgaagctgctttcctcgcacggacg
tatttgccaagccaagtttccagggtggttaaactctggagggagaacctctctaaagtc
aatcagaaggctgctgagtcccttgctgatcccacagaatacgaaaatcttttccctgga
ttaaaggaagcttttgttgctgaagagtatgttaagcaaagtcttgctgagttgaggcca
gccagggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaagcaaaa
ggatttgagccctctggaataatgccatctcagaaggctgaagaaccagttccctctcct
aaacaagaagtgatgaagacagttgtgcagaattctgataaccttccagcaagagaccaa
aagacactgctggacttggaagatgacttagataacttggatctggaggatattgatacc
acagatatcaatctggatgaagagatcttagatgagtga
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