Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451722
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Entry
135451722 CDS
T09958
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135451722 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135451722 (DHX36)
03012 Translation factors [BR:
zle03012
]
135451722 (DHX36)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135451722 (DHX36)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135451722 (DHX36)
Translation factors [BR:
zle03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135451722 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
AAA_22
HA2_N
nSTAND3
ATPase
AAA_19
Sir1
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
135451722
NCBI-ProteinID:
XP_064577246
LinkDB
All DBs
Position
9:24790810..24806168
Genome browser
AA seq
985 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRGHGSDGGAAAASSAAGGGGGGRGRHPSHLKGREIGLWYARRQG
QKSRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPAKV
KPDAEKAPVRQIPTWEKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRF
REKLPSYGMREELVRLINSNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQ
PRRISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDK
HLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRQDLKVILMSATLNAEKFSEYFDHCPM
IHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRLHWRRGFMQGHMSRPEKEEKEEIYRQQW
PGYLRQLQGRYSASTISALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNIST
LHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDV
VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLL
DDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQ
EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADA
RRKELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAE
HLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKT
DGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDK
DQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIESPHPVDWDDIQSRDTAVLTAI
IDLITTQENEGVRNFAPRFQGERYS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgtgactggggccgcggtcgcggccggggccggggccacggc
agcgatggcggcgccgccgccgcctcctccgcggcgggcggcggaggcggcgggcgggga
cggcaccccagccacctgaagggccgcgagatcgggctgtggtacgcccgcaggcagggc
cagaagagccgggacgccgaccggcagcagagagctgtggtgcgcatggacgagcgccgg
gaagagcaaatcgtgcagctgctgaattctgtccagactaaaaacgacaaagagcaagaa
gccatgtcctggtggtctggggatgaagaaggccctgctccagaacagcctgccaaagtg
aaaccagatgctgagaaagctcctgtgagacagataccaacctgggaaaaaacatccctg
gatttggatgtggaattcctctgtgaaaaaaccgagcaggatgctgatttagatgaacaa
cttaaagaagacttaatgaagaagagatctgatcccagatatattgaaatgcagagattc
cgagagaagctgccctcatacgggatgagagaggagctggtgaggctgatcaacagcaac
cgcgtgacggtgatcagcggcgagacgggctgcggcaagaccacgcaggtgacacagttc
atcctggacgaccacatcgagcgtggcctgggctccacctgcaggatcgtgtgcacacag
ccccgcaggatcagcgccatctccgtggctgagagagtggctgcagagagggcagagagc
tgtggcaatggcaggagcacggggtaccagatccgcctgcagagccgcttgccaaggaaa
caaggttccattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataag
cacttgtccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatcttcaatca
gatgttttaatgagcattattaaagatcttctgaatgttcggcaggatctgaaagtcata
ctgatgagtgctactttaaatgcagagaagttttccgagtactttgaccattgcccaatg
attcacatccctgggttcactttcccagtggtggaatatctgcttgaagatgtcattgag
aagttgaggtacaccccggagaagacggaccgccggctgcactggaggagaggcttcatg
cagggccacatgagcaggccagagaaggaggagaaggaggagatctacaggcagcagtgg
ccgggttacctaaggcagctgcagggcaggtattcagcaagcacaatcagtgccttggaa
atgatggatgatgacaaggtggacctggaccttatagcagcactgatcagacacattgtg
ctggaagaggaggatggtgcaattctggtgtttctgccaggctgggataacatcagcact
ttgcatgagctcttgatgtctcaagtcatgtttaagtcagataggtttattatcatccct
ttgcattcactgatgcctactgttaaccagactcaggtgttcaagaagaccccgccagga
gtcaggaaaattgtgattgccaccaacattgcagaaaccagcatcacgattgatgacgtg
gtgttcgttatagatggggggaaaataaaggagactcactttgacacccagaacaacatc
agcaccatggctgcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagca
ggaagggttcagccaggccactgttaccatctgtacaacgggctgcgtgccagcctgctg
gatgattatcagttaccagagatcctgaggacacccttggaagaactctgcttacaaatc
aagatcctgaggcttggtggaattgcctattttctgagcaaactgatggaccccccctct
cgtgatgctgtgatgttggccataaatcacctcatggagctgaatgctctggacaggcag
gaggagctgactcccctgggtgtgcacctggcacggctgcccgtggagccacacatcggg
aagatgatcctgtttggagccttgttctgctgcctggaccccgtgctgaccattgcagcc
agcctcagcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgca
agaagaaaggagctgtcaaagaactcgaaaagtgaccatctgactgtggtgaatgccttc
actggctgggaagaggctcggagctgtggtttcaggaatgagaaggactattgctgggaa
tatttcctgtcctcaaataccatgcagatgctgcataacatgaaagggcagtttgctgag
catctccttgcagctggatttgtgaatagtagaaaccccaaggatcccaaatctaacacc
aactcaggtaatgagaagctgctcaaagcagtcatctgtgctggcctctaccccaaagtg
gcaaagatccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagaca
gatggatcagtcaatatccatcccaaatcagtgaatgtggaggagacagagttccattat
aactggctggtgtaccatttgaagatgaggaccagcagtatttacctgtatgattgtacg
gaggtgtctccatactgcctcttgttctttggaggggatatatccattcagaaggataag
gaccaggacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaatagca
aacttggtcaagaaactgcgaaaagaactggatgaccttctacaagagaaaatagaaagc
ccccatcccgtggactgggacgacatccagagcagggacacagcggtgctgacggcgatc
atagacttgatcaccacgcaggagaacgagggcgtgcggaacttcgcgccgcgcttccag
ggcgagcgctacagctga
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