Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451854
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Entry
135451854 CDS
T09958
Symbol
RHBDD1
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135451854 (RHBDD1)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
135451854 (RHBDD1)
Peptidases and inhibitors [BR:
zle01002
]
Serine peptidases
Family S54: Rhomboid family
135451854 (RHBDD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM_2
Motif
Other DBs
NCBI-GeneID:
135451854
NCBI-ProteinID:
XP_064577502
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Position
9:9726672..9755934
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AA seq
313 aa
AA seq
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MERRQRGVSAGLLLLLYQISQVGLQNIPAVTLGVLVLNIFLFLNPLRPLSEVCLSVNEAV
HKKNWQRLLLSPFHHADDWHLYYNMISMLWKGIMLERKLKSIWFAYIIAVFSVLIGVVYM
VLEVLLVIILDDPSYEMNCGVGFSGVLFALKVLNNHYNPGRVSSVFGLPISSKYACWVEL
LAIHFISPGTSFAGHLSGILVGLMYTMGPLKKIMRACAAGISFFTEPDRPRDYYSEYYGY
YPDYQHRVPRSYFDYTGGLTEEEQLERAVLNSLNERDVGGGTHNHGQRPYGFWFPPENSE
EDMRRRRLRRFDR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaaggcaaagaggagtcagtgctggactgcttttgctgctttatcaaatttct
caagttgggctccagaacattcctgctgttacccttggggtacttgtgctgaatattttt
ctctttctgaatcctttgaggccgctctctgaagtgtgtctcagtgtaaatgaagctgtc
cacaaaaagaactggcagcgtttgctgctttctcctttccaccatgcagatgattggcac
ttgtattataacatgatttccatgctctggaagggcataatgctggaaagaaagctgaag
agcatatggtttgcttacataattgcagtattttctgtactgattggagtagtttacatg
gtgctggaagtcctgcttgtgataattctggatgatccttcctatgaaatgaattgtggc
gtaggtttttcaggagtcttgtttgctttgaaagttctgaacaaccattacaacccagga
agagtgagcagtgtctttggattgcccatatccagtaaatatgcgtgttgggtggagctg
ctggctattcatttcatctccccagggacttcttttgctgggcatctgtcagggattctt
gttggattgatgtacactatgggacctctgaaaaagatcatgcgagcctgtgcagctggc
atttctttcttcactgagcctgacaggccaagggactactattcagagtattatggctat
tatccagattatcaacacagagttccaaggagctactttgattatacaggtgggctcact
gaagaggaacagcttgaaagggcagtgctaaacagtcttaatgaaagagatgttggtgga
ggaacacacaatcatgggcagcggccttatgggttttggtttccacctgagaactcagaa
gaggacatgagaaggcgaaggcttcgtagatttgacagatga
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