Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451888
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Entry
135451888 CDS
T09958
Symbol
HES1
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03460
Fanconi anemia pathway
zle04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135451888 (HES1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135451888 (HES1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135451888 (HES1)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135451888 (HES1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
135451888 (HES1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
135451888 (HES1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
IL11
ALTTAQ_rpt
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
135451888
NCBI-ProteinID:
XP_064577555
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All DBs
Position
9:complement(13530236..13532304)
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AA seq
258 aa
AA seq
DB search
MPADLMEKSSASPVAATPASVNATPDKPKTAAEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRSLQRAQMTAALSTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINTMNYPAPPPPPPLPPAAAFGPPLVPPGGG
VGPLPGMPCKPGADAAKVYGGFQLLPASDGQFAFLIPSTAFAPGGAVLPLYGGPPTAATA
ASPPGPPPGTADSVWRPW
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacctgatggagaagagtagcgcctcgccggtggccgccacccccgccagc
gtcaatgcgacgcccgacaagccgaagacggcggctgagcatcgcaagtcctccaagccc
atcatggagaagcggcggcgggcgcgcatcaacgagagcctagggcagctgaagacgctc
atcctggacgcgctgaagaaggatagctcccggcattccaagctggagaaagccgacatt
ctggagatgaccgtcaagcacctgcggagcctccagcgagcccagatgactgctgccctg
agcacagaccccacagtcctgggcaagtaccgagctggcttcagcgagtgcatgaacgag
gtgacgcggttcctctccacctgcgagggcgtcaacactgaggtgcgcacccggctcctg
ggccacctggccagctgcatgacccagatcaacaccatgaactaccctgcgccccccccg
ccgcccccgttgccaccggccgcagcctttgggccacccctggttcctccaggcgggggc
gtggggccgctcccgggcatgccctgcaagccgggtgccgatgcggccaaggtgtacggt
ggcttccagctgctgccggcctctgatgggcagtttgccttcctcatccccagcactgcc
tttgctcctggtggagctgtgctgcctctgtatggcggcccacccacagctgccactgct
gcctcgccgccaggcccgccacctggcacggccgactcggtctggagaccctggtga
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