Zonotrichia leucophrys gambelii (white-crowned sparrow): 135451903
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Entry
135451903 CDS
T09958
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135451903 (TTF2)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135451903 (TTF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
135451903
NCBI-ProteinID:
XP_064577583
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All DBs
Position
1:complement(88933031..88951244)
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AA seq
1172 aa
AA seq
DB search
MEAVLCSEHGSLCFLKTGVRDGPNKGKSFYVCGTQGPAACGFVLPAQVPASYCLIHEGCV
VELQVLVQQPDRDEYQLFYRCLKSKLNGKKWCGSFPWQDPKANKVSNPLESQPRTVPFFN
PASQRNPFKVLDENQAPSSWKQMKQRNGEEIKTKGAKAENESVLVSHKEKKLTSESSIET
VPLEELKNKKKSSTGSKSDPELQETTVSESKLCLSETRKGKNTLSEEEKYGGSARESKKP
SDCVEKEPGTRSKFLPLSLGKQSTSTKPPGKEQLGEKSLKSCRDKDTRKKDCNGQNNGEM
TPMSKEYAPSPAGVQSASECAALRGRAEAELPKAQLRPGLPQSPGEASASDSDKEEFVCS
SSGESKPEKSVEIPSGKSGKSVQGTPLPGAAASYHMEGPQDPKVLHNRLLLELKQKKSTL
ATVNVQMLPDKGERLLKQVQDLEAALSALNISAADTSEKGQDSTSSSCCEESLSNPVGRP
GGTKSIAPLLLQDPTAKASAGSQSHLSVAATLGSSGQSFGMSVGVQNLYGGRMTEDRIRA
VHSATFEAINHLHKSLESCPAEETAAEDPAGLKVPLLQHQKQALSWLLWRESQRPCGGIL
ADDMGLGKTLTMIALILAQKQLKTEKRKETLEIWLSKNDFTVIPSHGTLVICPASLIHHW
KKEIERRVVFGKLRVYLYHGANRDKHAEVLSGYDVVVTTYSLLSKETPTTKEEGEVPAQD
HDVESGSSPCSPLLRVAWARIILDEAHNIKNPRVQTSIAVCKLRASARWAVTGTPIQNNL
LDMYSLLRFLRCSPFDEYKVWKYQVDNNTRKGGERLSLLTRSLLLQRTKDQLDSAGKPLV
SLPQRRTQLHQLKLTAEEQSVYNVLFARSRSTLQSYLKRQEQKNEDREYDGGNPFEKVAQ
EFGVSQKEFLAGSRSASQVSSTVHVLSMLLRLRQCCCHLSLLKVALDQVNLNSEGLAHSI
EEQLGALTLSELQAPDSKSTVYLNGTAFQTDIFDITRESTKIAQLLAELKTIQSHPEPHK
SVVVSQWTSMLKVVAVHLQRLGLKYATVDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLA
GGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQ
KRKKGLAQQVLSGKGETFTKLTLADLKILFGI
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgctgtgctccgagcacgggtccctctgcttcctgaaaacgggcgtccgc
gatggccccaacaaagggaagagcttctacgtgtgcgggacgcagggccccgctgcctgc
ggcttcgtcctcccagcgcaggttcctgcttcttactgcttgatccatgaggggtgcgtg
gtggagctgcaagtcctggttcagcagccggacagagatgaataccagttgttttaccga
tgccttaagagtaagttgaatgggaagaaatggtgtggaagcttcccatggcaggatcca
aaagctaacaaagtgtcaaaccccttggaatcccagcccagaacagtacctttcttcaat
cccgctagccaaagaaatccattcaaagtgctagatgagaatcaggcaccatcatcctgg
aaacaaatgaagcaaagaaatggagaagaaattaaaacaaaaggagctaaagcagagaat
gagagtgtgctggtatcacataaagaaaagaaattgacctctgagtcctccatagagaca
gtacctctggaagagctcaaaaataaaaagaaatcatccacaggaagtaaaagtgaccca
gaacttcaggagactacagtgtctgaatccaaactttgcctttctgagactaggaaaggg
aaaaatacactttcagaggaagagaagtatggtggcagtgccagggaatccaagaagcct
tctgattgtgtggagaaggagccaggcacaagatcaaaattcttaccgctaagtcttgga
aagcaaagtacaagtaccaagcctccaggaaaggagcagcttggagaaaaaagcttaaaa
agttgtagggacaaagacacaagaaagaaagattgcaatggtcagaacaatggtgaaatg
acaccaatgtctaaggaatatgccccttccccagcaggagtacagtcagcatcggagtgt
gctgccctgaggggaagggcagaggcagagctgcccaaggcacaactcaggccagggctg
ccacagtctcctggtgaagcctctgccagtgatagtgataaagaagaatttgtttgttcc
tcatcgggtgaaagtaaacctgagaaatcagttgagattccttcaggaaaatcaggaaag
agtgtgcaggggacacctttgccaggagcagcagcatcgtatcatatggaaggaccccag
gaccctaaagtgcttcataaccgtcttctacttgagctgaaacagaaaaagagtaccttg
gctacagtgaatgttcagatgctgccagataaaggggagcgcttattaaagcaagtgcag
gatttggaagctgcactcagtgctcttaacatttcagcagcagatactagtgaaaaaggg
caggatagcacaagcagcagctgctgtgaagagtctttatctaacccagttggcaggcca
ggtggtacaaagtcgatagcacctctcctgcttcaggatcctacagcaaaggcctctgct
ggctcacagagtcacctctcagttgctgctactttgggttccagtggccaaagttttgga
atgagtgttggtgtgcagaatctgtatgggggaagaatgacagaagaccgaatcagggct
gtacacagtgccacatttgaggctattaatcatcttcacaaatctctagaatcttgtcca
gcagaggagacagcagctgaagatcccgctggactgaaggtcccactgctgcagcaccag
aaacaggcgctctcgtggctcctctggagagagagtcagaggccgtgtggaggaattctg
gcggatgacatgggcttagggaagactttaaccatgattgctctcattctggcccagaag
cagctgaagacagagaaaagaaaggagacattagaaatatggctatccaaaaatgacttc
actgttatcccttcccatggcactttagttatttgtcctgcatccttgatccatcactgg
aagaaagagattgagagacgtgtggtctttggcaaactgagggtctatctgtaccacggg
gcaaatcgagataagcatgcagaggtgctttctggatatgatgttgttgtcacaacctac
agccttctctccaaggagactcccacaaccaaagaggagggggaagtccctgctcaggac
catgatgtggagagtggatcatctccctgttcccctttgctcagggtagcttgggctcga
attatattggatgaagctcacaatattaaaaacccacgggttcagacctctatagctgtg
tgcaaattgagagccagtgccagatgggctgtcactggtacgccaatacagaacaacttg
ctggacatgtactctctgctgaggtttctacgttgctctccttttgatgaatacaaagtt
tggaagtaccaggtagataacaacacaaggaagggaggggagaggctaagcctgttaacc
aggagcctcttactgcagagaactaaggaccagctggattcagctggcaagcccctggta
tctctaccccagcgtagaacgcagttgcatcagttaaaacttacagcagaggagcaatct
gtgtacaatgtgctctttgcacgatccaggtcaacactacagtcatacctaaagagacaa
gagcagaaaaatgaagacagagagtatgatggtggtaacccctttgagaaagttgcacaa
gagtttggagtcagtcaaaaggaatttctagcaggctcacgaagtgcctcccaggtctca
agtactgtccatgtcttgtccatgctcttgaggctccgtcagtgctgctgccatctgtcc
ttactgaaagtggctctggatcaagttaacttgaacagtgaaggccttgcacactccatt
gaggaacagcttggtgctttgacactgtctgagctccaggctcctgattccaagtcaaca
gtctacctcaatggcacagcttttcaaacagatatctttgatatcaccagggagagcacc
aagatagctcaactcttggccgaattgaaaactattcagagtcacccagagcctcataaa
agcgtggttgtctctcagtggacaagcatgctcaaagttgtagctgtgcacctgcagcgc
ctggggctgaagtatgccacagtggatggctctgtcaatcccaaacagaggatggatgtg
gtggaagagttcaataacaatcccaaagggcctcaggtaatgttggtctcgttgctggct
ggaggcgttggcctgaacttgactggaggaaaccatctctttctccttgacatgcactgg
aatcctgctctggaggaccaggcatgtgaccgcatttaccgagtggggcagaagaaggat
gttgtgatacacagatttgtctgtgaaggaacagtagaagagaagatcctacaactccag
aagaggaagaaaggtcttgcccagcaggttctgtcaggcaaaggagaaaccttcactaag
ctcactttggctgacctcaaaattctctttggcatctaa
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