Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452048
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Entry
135452048 CDS
T09958
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135452048 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135452048 (MYO5C)
04131 Membrane trafficking [BR:
zle04131
]
135452048 (MYO5C)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135452048 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135452048 (MYO5C)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
135452048 (MYO5C)
mRNA cycle factors
P-body specific factors
135452048 (MYO5C)
Membrane trafficking [BR:
zle04131
]
Others
Actin-binding proteins
Myosins
135452048 (MYO5C)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
135452048 (MYO5C)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
135452048 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
135452048
NCBI-ProteinID:
XP_064577850
LinkDB
All DBs
Position
10:8476079..8509758
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDSFLHVQLEDGTELSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNADVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFHYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKKDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMARWLCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCADFFQDSPVSISPF
SSAINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDRLRQACTLLQRRVRGWLQRRRFLALR
RAALTVQQYYRGQRTVRQAITARNLKETWAAIVIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKRIEE
QSRENHGLLERLTNLASAHMNDVDTIQKLESELEKLTAQKKTYEEKGKKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDELTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQQQIQQEIITQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTTKLKEMSNRLHYELERDRTQRRTT
EAQNEVDIKEKENLKDTIQGIEGLSNGLMQDEIQGELQSKIKQVTTRLAVEDMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKSEALVPTVPKEYIGMMEYKKEDEERIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKHNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQFIIVMEN
NIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYMEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagacagttttcttcatgtg
cagttagaggatggaactgagctgagttaccctgttgatccagctgctttgccaccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgcactcagttacctgcatgaa
ccagctgttctacacaaccttaaaattcgttttgtggaatctaaacttatctacacatat
agtgggataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatacagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaaggaataacaaaaatcagtccattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtacaccatgagatactttgccact
gtgagtaagtcaagcagcaatgctgatgtggaggataaagtattggcatccaatccaata
accgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtcgatttgggaaa
tacactgaaatcagttttgatcagagttaccaaatcattggagctaacatgagaacgtac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatatgaacatcttaaattgggaagtgcg
gaagagtttcactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagaaggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaagacaaacacctcagtatattctgtgag
cttctggatttaaactgtgacaaaatggcccggtggctgtgccacaggaagattgtcacc
acctcagagaccgtggtgaagcccatgacaagggcccaggctgtcaatgccagggatgct
ctggcaaaaaagatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaagcagcacaccttcattggtgttttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtacaataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacttctttcatcattcagcactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcagatttttttcaagacagtccagtgtccatctcacctttc
agttcagctataaacatcaaatctgccagacctgttctgaaatcacccaacaagcagctc
cggaccactgtgggcagtaagttcaggaattctttgtctttgcttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaaattgccttttgag
tttgattccaagagagttgctcagcagctgcgagcatgtggtgttttggaaacgattcgg
attagtgcacagagctacccgtccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggagctctccataaatgacaagaaacagatttgcaagattgtt
ttgcagaggctgatccaggatcctaaccagtatcagtttgggagaacaaagatatttttc
agggcggggcaggtggcttacctggagaagctgcgctcggacaggctgcggcaggcgtgc
acgctgctgcagcggcgcgtgcggggctggctgcagcgccggcgcttcctggccctgcgc
cgcgcggcgctcaccgtgcagcagtactaccgcgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaaggaaacatgggcagctatagtcattcagaaatactgtcggggt
tacctcgtccgtagactttgccagctcatccatgtggctgctgtaacaatccaagcttac
acaagaggatttctagcaagaaaaaagtatcgcaagatgcgtgaggagcagaaggctgtg
gttctgcagaagtacgcccgtgcgtggctggccaggcgcaggttccagaacattcggcgc
ttcgtgttgaatatccagctctcatacagagtccagcagctgcagaaaaggatagaagaa
cagagtagagaaaatcatggcttgctggaacgattgaccaatctggcttcagctcatatg
aatgacgtggatacaattcagaaacttgaatcagaactcgaaaaattaactgctcaaaag
aaaacatatgaagaaaaagggaaaaaatataaagaagacagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaggagaccttagaaataaagctccaa
gaaaaaactgaggaaatgaaagagaaaatggatgagctcacacagcaactcttcaacgat
gtacaaaaagaagaaaaccaacgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaactgctgaagggagaaattaagattctgaaagaagaaaaa
actcagctacagcaacaaattcagcaagaaattatcactcaggacggcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacctgagttgcaaaaggaaattgaactt
cttcagacacagaaactggatgttgaaaagcaggcccactcacagaagagagaattgagg
gaaaagatgtcagaagttacaaagcagcttcttgaaagttatgattttgaagatgtaagg
agcagactctctacagaggatctggaacacttaaatgaggatggagaactgtggtttgct
tatgagggcttgaaaaaagccacaagagtactggaaagccatttccagtctcagaaagaa
atatatgagaaagagattgaaggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacataaacgatggcattaggctggaa
gttagcaggctgacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagaccttgaaaaccgtcttcaagagcagaccacaaagttgaaa
gagatgtcaaatcggctgcattatgagctggaacgggacaggacacaaagacgaactact
gaggcccagaatgaagtagacattaaagaaaaagagaatctgaaggacaccatccaagga
attgaggggctgagcaatggtttgatgcaagatgaaatccagggtgaactacaaagcaag
ataaagcaagtgacaactcgactcgctgtggaagacatggatcttgaagaaaagctggac
atgaaagacagaataataaaaaaattagaagatcagatcaaaactctgaccaagactatt
gaaaaatctgaagcccttgtgcccactgtgcccaaagagtacattggaatgatggagtac
aaaaaagaggatgaagaaaggatcattcaaaatcttatccttgatttgaagccccgtgga
gttgtggttaatatgattcctggccttccagctcacatcctgttcatgtgtgtgaggtat
gcagattacctgaacgatgctgacatgctgaagtctttcatgaatgtgaccattgatggc
atcaagcaggttgttaaggaacattcagaagactttgagatgttgtcgttttggctttcc
aacacatattattttcttaactgtttgaagcagtacagcggggaagaggaattcatgaag
cataacactccacgtcagaataagaactgtctgaagcattttgatctctcagaatacaga
caaattctcagtgatttggccattcaaatatatcaccaattcattattgtaatggagaac
aacattcagcacatgattgtaccaggcatgctggaatatgaaagtcttcaaggaatttct
ggcttgaaacctacggggttccgtaaacgttcttccagtatagatgacacggatacctac
accatgacctctatcttgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactctgagctcctaaagcaggcagtgaagcagcttttctttctgattggagctgtc
accctcaatagtctcttcctccgcaaggacatgtgctcctgtagaaaaggaatgcagata
agatgtaatatcagctacatggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaacgttggagcccttgtctcaggcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgtacatctctttctactgtgcagata
gttaagatcctgaactcatacactcccatagatgactttgagaaaagagtgactccatcc
tttgttcggaaggtccaggctatgctaaacaaccgtgaggatgtcccacagctgatgctt
gataccaagcatctcttccaagtgacgtttcctttcaccccctctccacatgctttggaa
ctgatacaagtccccagcagcttcaaacttggctttctcacgagggtttaa
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integrated database retrieval system
