Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452056
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Entry
135452056 CDS
T09958
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135452056 (DENND4A)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135452056 (DENND4A)
BRITE hierarchy
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
DUF2464
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
135452056
NCBI-ProteinID:
XP_064577863
LinkDB
All DBs
Position
10:complement(18142383..18192911)
Genome browser
AA seq
1884 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKMAKPKEPITDVTVLNKSLGEEVPQ
GYTCIEVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
STPYGRPANISGSASSQRVYITFRRAAESMSQNSLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEEKLTEKQKSQLGLAAAVEGK
DTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILIH
SLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDPP
PDVSCVDLDTNTISQTGDKKTIAWKILPKKPCKNLMNTLNTLYQQLAELQQRPREDALME
LAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFEL
QGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGETR
LIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLELFERPEGFLRAPNNK
LSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYVK
VCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAGI
DPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPASTAHTSVP
GGLSDTANNTSLKEEAKQGKTCLQDIQEQKEDKRESDSSSLSEVESTKGSGDCLPKLNYQ
SSGKDKAASSIVRLNGTIGSTVAQGSRESSVGLLFTSSFEDANEAEVLKSKSLRKRHKSA
VEADLREMPWEGRNRNLSGDGLVGLMMNRINQEANPGEIVEKLGADAKILSSALQKSIRP
KTLNIRSSSLESKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDGEPETPTAVKTS
SEKSKKLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEEEEDDDDRSVSTPSARRD
LAEEIVMYMNNMSSPLSSRAPSIELQKPFDDRNANKRSPTIIQPCRRSSLPPNSPRPPSL
TKSKSYHAKHEERPRDRLWSSPAYSPNSPAREQDTSSALTLVSSPSFNLDTLLTPKFDVL
KSSMFSAGKGVAEKASKWYSKFAMYAASAKDQNSDRASVSSLGALDSESTSLTDEDVCND
FESASPQENTTSEIKGISISKTSLESSASHDSSAKQFDQCGSLSKFPLPDKSELVSSCST
SSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLS
IEIRDLRRPGRYFLKSSPSTENMQFPSLFSNQSGKSCNTTATVGLTTSLMSVQEDINSNS
KSKQHDNVYARSIQIPSGRRQNASGSECTSHPVARSISTFGPLEEDEKENQKISHIIPTG
SLPATLQGPTDPLSLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFVDHH
PIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDNMKLH
QDPRQPLYILWNAQSQNRTLLFETQKYPMVQLLQKDDDSFNQELLRSMVKSIKMNDVYGP
MSQILERLNKWPHVKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQVKN
THNCDRPPSTGVMECRKIFGEPYL
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggcccgagttgctgattactttgtggtcgcaggactgacggatatc
tcaaagcccctggaggaggagatccacttcaatgatgcctgccataaaatggccaagcca
aaggagcccatcacagacgtgaccgtcctcaacaaatccctgggggaggaggttcctcag
ggctacacatgcatagaggtcactccctcgggcctgtctgcagatctcaacaatggcagc
ctggtaggaccgcagatatacctttgctatcgccgaggcagggataagcctccactcact
gatctgggggttttatatgatgggaaagagagggtgaagcagggctgtgaaatcattcag
agcaccccgtacgggcggccggccaacatcagcggcagcgcctcctcgcagcgcgtgtac
atcaccttccgcagggctgccgagagcatgagccagaactccctggctgtcacagacatc
tgcatcatcatccccagcaagggagagactcctccacacaccttctgcaaggtggacaag
aatctgaacaacagcatgtggggctcagccgtctatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcctgaagaagattat
gaatcattcccattaccagaatctgtgcctcttttttgtctccctatgggtgcaacgatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtgtatggtgctgctattcagttttatgagctgtatcctgaa
gagaagctcacagagaaacagaaatctcagctggggttagcagctgctgtcgagggcaaa
gacacgtgcagaacagtgcagacaaacaaatgcatctgcctgctctctcactggcctttc
tttgatgctttcaagaagtttctcacctttctgtatcgttactccatttctgggccacat
gtcctccccattgagaaacacatttcccatttcatgcataaagtaccttttccatcccct
cagaggccaagaattctagttcagctatctccacacgataacttgattcttagccagcct
gtgtcatcaccactcccactaagtggtggcaagttttctacactacttcagaatttagga
cctgaaaatgcagtaactctgttggtgtttgctgtgacagaacataaaatcctcatccac
tcattgcgaccttctgtcctcacgagtgtgacagaggcattggtctctatgatatttccc
ttccactggccctgcccatacatccccctgtgtcccttggccctggcagatgtgctgagt
gccccgtgcccgttcatagtggggattgattccagatactttgatctctatgacccccca
cccgatgtcagctgtgttgacctggataccaacacaatttctcaaactggagacaagaaa
actattgcatggaagatcctaccaaagaaaccttgtaaaaatctgatgaacactttgaat
actttatatcagcaactggcagaattgcaacagcggccaagagaagatgcattaatggaa
ttggcaatgaatgattatgattttaattctgggaagaaattgcatctgttagatttggag
atccaggaagcatttctctgtttcatggcttcaatcctaaaaggttacaggtcttacctc
aggccaataacggaggcaccctctgaaacagccacagatgcaagttctctctttgaactg
caagggttcctgaagagcagagaccgttcccatcagaagttctacaccctgatgaccaaa
acccagatgttcattcgcttcattgaggagtgttcttttgtcagtgacaaggatgccagc
cttgccttcttcgatgactgtgtggataaagtagacatggacaaaactggggaaacacga
cttatagagctggatgagtcctacaagagcgagcacacagttttcataacaccccctgag
atccctcatctgccaaatggggaggagcaccctctgcaatacagctataatggatttcca
gtattaaagctagaattgtttgaacgacctgaaggatttctcagagcaccaaataacaaa
ctgtcctcaaaagccagtagccccaacagcccatccccaatgttcagaagaactaaacag
gaaattaaatctgcccacaaaattgccaagaagtactcctccatcccccagatgtggtcc
aggtgtttgctccgtcactgctacggcctttggttcatctgcctccctgcctatgtgaag
gtgtgccactccaaagtcagggctctgagaactgcctatgacgtgctgcagaaaatgcac
accaagaaaatcgatccacctgacgaggtgtgctaccgcgtgctgatgcagctgtgcggg
cagtacgggcagcccgtgctggccgtgcgcgtgctcttcgagatgcagaaggctggcatc
gaccccaatgccatcacctatggctactacaacaaggctgttttggaaagcacctggcct
tcaagcaatcgaggtggctatttcctctggatgaaaatacgaaatgttgtcttaggaata
gcacagtttaaaaaagcattgaaaaagctaccagcaagcactgcacatacatctgttcct
gggggactttcagacactgccaataacacatcactcaaagaagaagccaagcaagggaaa
acttgtcttcaagacatccaagaacaaaaggaggacaagagggagagtgactccagttcg
ttgtctgaggtggagagcacaaaagggagcggggactgcctgcccaagctgaattaccag
agctctgggaaggacaaagccgcttccagcatcgtgcggctcaacggcaccattggcagc
acggtggcacagggcagcagggagagttctgtaggattgctgtttacgtcatcttttgag
gatgccaatgaagcagaagttctaaaaagcaaatccttaagaaagagacataaaagtgca
gtggaagctgacttaagggagatgccctgggaaggcaggaaccgcaacctgagtggggat
ggcttagtgggactcatgatgaacagaatcaaccaggaagcaaaccctggagaaatcgtt
gaaaaactgggagctgatgccaaaattctatctagtgcattacagaaaagcataaggcca
aaaactcttaatatcagatcttcctctttagagtctaagagagaaagcctggagaaagaa
tccagtgatgaagatgcagcctttgattgcagttttacagataaaacagagtctcctgtt
atctttgatctggaagacctggatggagaacctgaaacacctacagcagtgaaaacttcc
agtgaaaaatctaaaaaattacaaaggaagagcagctttccagtaaagccagttgaaaaa
acagatgttgaaactggatttgatccattgtctctgctggttgctgagacagagcagcag
aaagaggaggaggaggatgatgatgacagaagtgtctctactccatctgcaagaagagat
ttagctgaagaaatagtcatgtacatgaacaacatgagcagccctttgtccagtcgtgcc
ccaagcattgagctgcagaaaccctttgatgacagaaatgccaacaaaaggagcccaacc
atcatccagccttgcaggaggtccagccttcccccaaactccccaaggccacccagcctt
accaaatccaagagctaccatgcaaaacatgaggaaaggccaagggacaggctttggtct
tccccagcttattccccaaacagcccagccagggagcaggacacaagcagtgccctgacc
ctcgtgtcatcaccctccttcaacctggacacgctgctgactcccaagtttgatgttctg
aaaagcagcatgttctctgctggaaaaggggttgcagagaaagcaagcaagtggtactcc
aaatttgcaatgtatgctgcatctgcaaaggatcaaaattcagaccgagcaagtgtttca
tctcttggagctctggactcagaatctacttctctcactgatgaagatgtctgtaatgat
tttgaaagtgcttctcctcaggagaacaccacctcagaaattaagggaattagcatcagc
aagacaagcctggaaagctcagcttcccatgacagctcagctaagcagtttgaccagtgt
ggttctctttccaagttccctttacctgacaaatcagagctggtgtcttcctgcagcacc
agcagtaccagcgtgttccagaactatgccatggaggtcctcatctcgagctgctctcgc
tgtcggacctgtgactgtttggttcacgatgaagaaatcatggcaggctggacagcagat
gattcaaatctcaataccacgtgtcccttctgtggcaatttatttctgccttttttaagc
atcgaaatccgagatctgcggcggcctggacggtattttctgaaatccagcccttctaca
gaaaatatgcagttcccatcccttttctccaatcagagtgggaagtcctgtaacacgaca
gccactgttggcctcactacatccctgatgtctgtccaagaggatatcaattcaaacagc
aagtctaagcaacatgacaatgtttatgccagaagtatccagatcccctcaggaagaaga
caaaatgcctctgggtcagaatgtacaagtcaccctgtagcaaggagcatcagtactttt
ggtcctttggaagaagacgagaaggaaaaccagaagatcagccatatcattcctactggt
agcctgcctgctactttgcaaggaccaactgatcccttgagcctggaatggcgcttgcct
agtcctgatcctataacggttccttacctcagtcctctggtggtgtggaaagagctcgaa
agcttacttgaaaatgaaggggatcatgcaataacagtggcagactttgtagatcatcac
cccatcgtgttctggaatttggtgtggtatttcaggcgcttggacttgcccagcaactta
ccaggattgatactttcttctgagcactgcaataagaactccaagattccacggaactgt
atgtcagaggacagtaaatatgttcttattcagatgctatgggacaatatgaaattgcat
caggatccaaggcagcctctgtatattctgtggaatgctcagagtcaaaatcgcactctt
ttgtttgagacccagaagtacccaatggtccagttactgcaaaaagatgatgactccttt
aaccaggagctcttgaggagtatggtgaaaagcatcaagatgaatgatgtgtatggacca
atgagtcagatactggagaggctcaacaagtggccacatgttaaaagacagaggagcctt
tacagagaaatactgtttctttcacttgttgccctgggaagagataacattgatatagat
gcttttgacagagagtacaaaatggcctacgatcgtctcaccgctaatcaggtgaagaac
actcacaactgcgacagaccgcccagcactggcgtgatggaatgcagaaagatttttgga
gaaccatatctttaa
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integrated database retrieval system
