Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452141
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Entry
135452141 CDS
T09958
Symbol
ACAN
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zle00535
]
135452141 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
zle00536
]
135452141 (ACAN)
04091 Lectins [BR:
zle04091
]
135452141 (ACAN)
Proteoglycans [BR:
zle00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
135452141 (ACAN)
Glycosaminoglycan binding proteins [BR:
zle00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
135452141 (ACAN)
Lectins [BR:
zle04091
]
C-Type lectins
Lecticans
135452141 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
CTD
V-set
UL45
Motif
Other DBs
NCBI-GeneID:
135452141
NCBI-ProteinID:
XP_064578028
LinkDB
All DBs
Position
10:complement(12771233..12820362)
Genome browser
AA seq
2069 aa
AA seq
DB search
MTTLLLVFVCLQAITAADSVELSDSSDGLEVKIPEQSPLRVILGSSLNIPCYFNIPEEQD
TSVMLTPRIKWSKLSNGTEVVLLVATGGRIRLNSEYREVISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDTIEVLVKGIVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATAPEKFTFQEAFDKCRSLGARLATTGELYLAWKDGMDVCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLHANQTGYPHPDSRYDAICYSGEDIESLVPGQFID
ELGSGLGGAFTVQTVTQTEVELPLSRNATEEEARGSIATLEPIEITPTATRLDESFTALP
DLFTTALTPETAATEEENVTREDGTAVWTVPEEATTIDLGTAFTTLAFGTASSTETAEVS
SAEEVVGMTATPELESASVFTVEDQLVRVTAAPGAGYLPEQPISPTGVVFHYRAATSRYA
FSFVQAQKACLENSAVIATPQQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRNNCIGDKE
NTPGVRSYGMRPASETYDVYCYIDRLKGDVFFATQPEQFTFPEAQRFCQSQNATLASVGQ
LHAAWKQGLDRCYAGWLADGSLRYPIVSPRPACGGDAPGVRTVYQHHNQTGFPDPLSRHH
AFCFRALPPVEEEGVTPFFEDVLATQVIPGVEGVPSGEEVTMETESATQPENQTAWGTEV
FPTDVSLLSVSPSAFPPATIVPEETSTNASLSEVSEEVTQSGEHQVSGESSASGWVPGVP
DTSGEPASGGFDLSGDHSAIGESGLPSVDLHASGFPPGESGLPSGDLSGVSSGVVDISGL
PSADGETSVSVSRIPEISGMPPEVESSGLPFGASGEISGTELISGVSSGEESGVASGFPT
VSLVDTTLVEVVTAATERQEEGKGSIGVSGEGDLSGLPSSEWDSSGGTHGLPSGAEASGE
PSGVPELSGLSSGGSELSGFPSGLDGSGETSGTHEISGQVDLSGLTSGTEGSSEASGVTF
VDATLEEVTTTSPVTGAEAKETLETSGLPSGDEDGSGMVSGSLDISGETSGHVDFGGSAS
GGLEMSGYPSGVTDSSGDISGVDVTSGLLSGEESGLTSGFPTVSLVDTTLVEVVTQPSVA
QEVGEGPSGMIEISGFTSGDRGLSGEGSGAVETSGFPSGDLSGEPSGIPYISGDFSGATD
LSGQSSTVADISGEASGLPGITLVTSDLVEVVTRPTISQELGGETVTFPYGLGTSGEGSG
SGELSGETSALPESALETSTAYEISGETSAFPETGTETSTIHEISGEASAFPEFSTETST
IQEISGETSAFPEIVTETSTSQEARGETSGYPEIIIEASTGQEESGETSAFPGSGTETST
IQEISGETSAFPEIRIETSTSQDISGETSAFPEIRIETFTSQEARGEISGYPEISIEAST
VHETSGETSAFPEISIETSTVHEISGESSAFPEIRIETYTNQEARGETSAYPEISIETST
VHETSGETSAFPEISIETSTVHEISGDMSSFPEISIETSTIHETSGEIPAFPEIRIETST
GEEARGETSTFPEISIETSTVHDISGETSAFPEFSIETPTSQEARSETSAYPEIFIETST
VQEVSGETSAFPEIRIGTPTSQEARGETFPEISIETSTLHETSGEASALPTDNIKTAATS
LASGEPFGTPEEREIPDTTSGAVTHSIAGISRETSAPDTVISTRTPDVEPTQGLRNPEEA
QLEMEPSPPVVSEQETETAVAPDNPHLLATTTAALPQVSQEAIDALGPTTEDLENCEEGW
IKFQGHCYRHFEERETWMDAETRCRQHQAHLSSIITPEEQEFVNSHAQDYQWIGLSDRAV
ENDFRWSDGHSLQYENWRPNQPDNFFSAGEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGT
VACGDPPAVENARTFGRKKERYEINAMVRYQCEPGFIQRHVPTIRCQPDGHWEQPRISCL
NPSSYQRRLYKRSPRSRSKPSGSAAHSTH
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttgctattagtgtttgtgtgtttgcaagccatcaccgcagccgactctgtg
gagctctcagacagtagtgatggcctggaagtcaagatacctgagcagtctcccctgcgt
gttatcctgggaagctccctgaacatcccctgttacttcaacatccctgaggagcaggac
accagcgtcatgctgaccccgcgcatcaagtggagcaagctgtccaacggcaccgaggtt
gtcctgctggtggccacgggtggcaggatccggctcaacagcgagtacagggaggtgatc
tccttgcccaactaccctgccatccccacggatgccacgctggagatcaaggcgctgagg
tccaaccacaccgggatctaccgctgcgaagtgatgtacggcattgaggacagacaggac
acaatcgaggtcctggtcaaaggcatcgtattccactacagagcgatctccacaaggtac
accctgaactttgagaaggcaaagcaggcctgtatccagaacagtgctgtcattgccacc
cccgagcagctccaggctgcctacgaggatgggtacgagcagtgtgatgctggctggctg
gctgatcagactgtcaggtaccccatccactggccccgggagcgctgctatggcgacaag
gacgaattcccaggagtgaggacctatggtgtccgtgagccagatgaaacctatgacgtt
tactgctatgcagagcaaatgcaaggcaaagtcttctacgccaccgccccggagaagttc
acctttcaagaagcgtttgacaaatgccgcagtttgggagcacgcctggccaccacgggg
gagctgtacctggcctggaaggacggcatggatgtgtgcagcgcgggctggctggccgac
cgcagcgtgcgctaccccatctcccgggcgcgccccaactgcgggggcaacctggtgggc
gtgaggacggtgtacctgcacgccaaccagaccgggtacccgcaccccgactcgcgctac
gacgccatctgctacagcggggaggacattgagagcctggtcccggggcagttcattgac
gagctgggcagcgggctgggcggtgccttcactgtgcagactgtcacccagaccgaggtg
gagctgcccctgtcacgcaacgccacggaggaggaggcccgcggcagcatcgccaccctg
gagccaattgagatcacgcccacggccaccaggctggacgagagcttcactgccctgcct
gatctcttcaccaccgctctcacacccgagacagctgccacagaggaggaaaatgtgacc
agggaggatggcacagcggtgtggactgtacctgaagaggccaccaccatagatttaggc
actgccttcaccaccttagcctttggcactgctagcagcactgaaacagcagaggtgagc
tcggcggaagaggtcgtggggatgactgccaccccggaactggagtctgcctcagtgttc
acagtggaagatcagcttgtgcgagtgacagctgcccccggtgccggctaccttcccgag
cagcccatctcccccacaggcgtggtgtttcactaccgtgcagccaccagcagatacgcc
ttctcctttgtccaagcccagaaggcctgcctggagaacagcgctgtgattgccaccccc
cagcagctccaggctgcctacgaggctggcttcgaccagtgtgatgctggctggctgcgg
gaccagacagtcaggtatcccattgtgaatccccgaaataactgcataggagacaaagag
aacactccaggcgtgcggtcatacggcatgcgcccggcctcagagacctacgacgtgtac
tgctacatcgacaggctcaagggcgatgtgttcttcgcaacccagccggagcagttcacc
ttccccgaagcccagcggttctgccagagccagaacgccacgctggcctctgttgggcag
ctgcacgccgcctggaagcagggcctggatcggtgctacgcgggctggctggcggacggc
agcctgcgctaccccattgtgagcccccggcccgcgtgcggtggcgacgcgccgggcgtc
agaaccgtgtaccagcaccacaaccagaccggcttccccgacccgctgtcccggcatcac
gccttctgcttcagagctctgcctcctgtggaggaggagggggtcaccccgttctttgaa
gatgtgctggcaacacaagtgatccctggagtggagggggtgccctcaggagaggaggtg
accatggagacagagtctgccactcagcctgagaatcagacagcctggggcacagaggtc
tttccaacagatgtgtcactgctctcagtgagtccatctgcttttcctccagctaccata
gtaccagaggaaaccagtaccaacgcttccctcagcgaagtgtcagaggaggtgactcag
tctggagagcatcaagtcagtggtgaatcttcagcgtctgggtgggttcctggagttcca
gatacaagtggagaaccagcttctggaggttttgatcttagtggagaccactcggccatt
ggagagagcggattaccatcagtagacttgcatgccagtggattcccacctggagaaagt
gggctgccctcaggagacctgagcggtgtgtcctctggcgttgttgatatcagtggcctg
ccctctgcagacggggagacatcggtatctgtttcaaggataccagaaatcagtgggatg
ccacctgaagtggaaagcagcgggctgccctttggagcgagcggagaaatctctggcact
gagctcatcagcggcgtgtcatcaggagaggagagtggagtggcctctggttttcccact
gtgtctctcgtggataccacattggtggaagttgtaacagcagcgacagaacggcaagag
gagggaaaagggtccattggagtcagcggtgagggagatctgtcagggctaccctcctct
gagtgggacagcagtggtggaacccatggcttgccctcaggagctgaggccagcggggag
ccctccggggtacccgagctcagcgggctgtcctcgggagggtctgagcttagtggcttt
ccctcaggactggatggcagtggagaaacatctggaacacacgagatcagtggccaggtg
gacctgagtggccttacctctggtacagagggaagcagcgaggcctctggcgtcaccttc
gtagatgccactctggaggaagtgacaacaacctcaccagttacaggagcagaggcaaaa
gagactttggaaaccagtggattgccttcaggtgatgaagatggatcaggcatggtgtct
gggagtttagacatcagtggtgagacttctgggcatgtagactttggtgggagtgcttct
ggagggctggagatgagcggatacccgagcggagtgacggacagcagcggagacatctct
ggagttgatgtcaccagtggtctgctctctggagaggaaagtggactcacctctggcttt
cccacggtgtctcttgtggataccactttggtggaagttgtaacacagccatcagtggca
caagaagtgggagaaggaccatctgggatgatagaaatcagtggatttacttctggagac
agaggactatctggagaagggtctggagctgtggagaccagtggttttccctcaggagac
ttgagtggagagccatctggaatcccatacatcagcggagacttttctggagccacagat
ctgagtggacagtcttcaacagtggctgatatcagtggggaggcctcagggctcccagga
atcactttagtcacttctgatttagtagaagtcgtgacaagaccaacgatatcacaggaa
ctgggtggggaaactgtcacgtttccctatggtttggggacaagtggtgaaggctctgga
tctggtgaactaagtggggaaacatctgcactgccagaaagtgctctagaaacatcaaca
gcttatgaaatcagtggtgaaacatctgcatttcctgaaacgggtacagaaacatccacg
attcatgaaatcagtggggaggcatctgcatttcccgaatttagcacggaaacatcaaca
attcaagaaatcagtggggaaacctctgcatttcctgaaattgtcacagaaacgtccaca
agtcaggaagccaggggtgaaacatctgggtatcctgaaattatcatagaagcatccact
ggtcaagaagaaagtggggaaacctctgcgtttcctggaagtggcacagaaacgtccaca
atacaagaaatcagtggggaaacatctgcatttcctgaaattagaatagaaacatccaca
agtcaagacatcagtggggaaacgtctgcatttcctgaaattagaatagaaacattcaca
agccaagaggccaggggtgagatatctggctatcctgaaatcagcatagaagcttcgacg
gtccacgaaaccagtggggaaacttctgcgtttcctgaaatcagcatagaaacttcaaca
gtgcatgaaattagtggagaaagttctgcatttcctgaaattagaatagaaacatacaca
aatcaagaagccaggggtgaaacatctgcctacccagaaattagcatagaaacttcaaca
gtccatgaaaccagtggggaaacttctgcgtttcctgaaatcagcatagaaacttctaca
gtccatgaaatcagtggggacatgtcctcttttcctgaaattagcatagaaacttcgaca
atccatgaaaccagtggtgaaatacctgcatttcctgagattagaatagaaacatccaca
ggtgaagaagctcgaggtgaaacatccacatttcctgagattagcatagaaacctctaca
gtccatgatatcagtggggagacatctgcattccctgagttcagcatagaaacaccaaca
agtcaagaagccaggagtgaaacatctgcctatcctgaaattttcatagaaacatccaca
gttcaagaagtcagtggggaaacttctgcatttcctgaaatcagaataggaacacccaca
agtcaagaagcccgcggagagacatttcctgagatcagcatagaaacatccacactccat
gaaaccagtggggaagcatctgcattgccgactgataacatcaaaacagctgccacatct
ttggccagcggggagccctttggtactcctgaggagagggagattcctgacacaacatct
ggagctgtgacacactctatcgcaggcatttcgagggaaacctctgccccagacactgta
attagtaccaggactccagatgttgaaccaacacagggactcaggaaccctgaagaggct
cagcttgaaatggagccttcccctcctgtggtgtcagaacaagagacagagacagctgtt
gctccagacaatccccatctgctggccaccaccactgctgccctgccccaagtctcacaa
gaagcaattgacgcattaggacccactacagaagacttggaaaactgtgaggaaggctgg
atcaagttccagggccactgctacaggcactttgaagagagggagacttggatggatgca
gagaccaggtgccgacaacatcaagcccacctgagcagcatcatcaccccagaggagcaa
gagtttgtgaacagtcatgcacaggactaccagtggatcgggctcagtgacagagctgtg
gagaacgacttccgctggtctgacgggcactccctgcaatatgagaactggcggcccaac
caacccgataacttcttttcggcgggcgaggactgcgttgtgatgatctggcacgagaaa
ggcgaatggaacgacgttccctgcaactatcacctccctttcacctgcaagaaaggaaca
gtggcctgcggggacccccctgccgtggagaatgccaggaccttcggcaggaagaaggag
cgctacgagatcaacgccatggtgcggtaccagtgcgagccaggcttcatccagagacac
gtgcccaccatccgctgccagcccgacgggcactgggagcagccacggatatcctgccta
aacccctccagctaccagcgcaggctatacaagaggagccccaggagccggtcgaaaccc
agcggcagcgccgcgcacagcacccattag
DBGET
integrated database retrieval system
